Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03970 ATGCAAATGTTCACATCACTTCTTAATTCTTGTTTAAATTCTTCTCTCCCCTTCATTATATTCCTCCTCTTTTTCTCTTCCTTTTCTCTTCTCCTTCAATGGTGGAAACACCATAGACATAAAAACAAACATTTACCCCCTGGTTCAATGGGCTGGCCTTACTTTGGAGAGACCCTCAAACTCTACACACAAAATCCAAATTCATTCTTCTCCACAAGGCAGAAAAGGTATGGAGACATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCTAGTCCTGAGGCAACAAGAACAGTGCTTGTGACTCAAGCACATCTTTTTAAACCAACATACCCTCCAAGCAAAGAGAAAATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCACTCCATGCTCAAGAAAATGGTTCAAGCCTCTTTTTTACCTTCCACAATTAAAAACTCTGTCTCTCTTGTGGACCAAATTGTACAAAAAATGGTCCCATCTTGGACTAACAGAACCATCAACACATTGGAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCTTTTGGTGAAATAAAGGAAATGGAAATGGAAGAAATAAGAGTGTTGTATCATTGCTTGGAGAAGGGCTACAATTCTTATCCTTTAAATCTTCCCGGAACTTCGTATTGGAAGGCAATCAAGGCAAGGAAGGTTTTGAATGAGATTATAAGGAAGATAATAGAAAGAAGGAAGGAGAGCAGGAACTATGGAGGAGGGTTGTTGGGCATTCTGTTGAGAGGAGGCAGAGGTGATCAACAACAACTACAACAACTGACTGATTCTCAGGTTGCTGACAATCTCATTGGTGTGATATTTGCTGCACATGATACCACAGCCAGTGTTCTAACATGGGTTCTTAAGTACTTGCATGACAATGTCAATCTCTTGGAAACTGTCAGAAAAGAACATGAAGGAATAAAAAACAAACTTGTTCGAGAAAACCGCGGTCTTTCATGGGAGGATACAAGGCAAATGCCCTTCACTAACATGGTAATTCAAGAGACATTAAGAAGTGCAAGTATATTATCCTTCACATTTAGAGAAGCAGTACAAGATGTGGAACTTGAAGGCTACACAATTCCAAAAGGTTGGAAAGTGCTTCCACTGTTTAGATCCATTCATCATTCACCTCATTTCTTCCCTCAACCACACAAGTTTGACCCTTCAAGATTCAAGATTCCACCAAGACCAAACACATATATGCCATTTGGAAGTGGAGTCCACTCTTGTCCAGGTAGTGAGCTTGCTAAGCTTGAGGTTTTTGTTCTTCTTCATCATCTCACCCTTAAATACAGGTGGGAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCTTTTCCTGTGCCAAAAAACGGATTACCAATAAAAATAACTACTATAAACAAGAGATAG 1449 0.3934 MQMFTSLLNSCLNSSLPFIIFLLFFSSFSLLLQWWKHHRHKNKHLPPGSMGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEATRTVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKMVQASFLPSTIKNSVSLVDQIVQKMVPSWTNRTINTLEEMKKYAFEVAANSAFGEIKEMEMEEIRVLYHCLEKGYNSYPLNLPGTSYWKAIKARKVLNEIIRKIIERRKESRNYGGGLLGILLRGGRGDQQQLQQLTDSQVADNLIGVIFAAHDTTASVLTWVLKYLHDNVNLLETVRKEHEGIKNKLVRENRGLSWEDTRQMPFTNMVIQETLRSASILSFTFREAVQDVELEGYTIPKGWKVLPLFRSIHHSPHFFPQPHKFDPSRFKIPPRPNTYMPFGSGVHSCPGSELAKLEVFVLLHHLTLKYRWEVVGNGDGIQYGPFPVPKNGLPIKITTINKR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03970 482 Pfam Cytochrome P450 46 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Vivi4g03970 482 Gene3D Cytochrome P450 35 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 FunFam Abscisic acid 8 35 478 - -
Vivi4g03970 482 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 SUPERFAMILY Cytochrome P450 38 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03970 482 PANTHER CYTOCHROME P450 26 42 468 - -
Vivi4g03970 482 CDD CYP90-like 73 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03970 Vivi-Chr4 160568030 160572321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03970 36 473 Cytochrome P450 AT3G19270 57.175 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03970 K09843 - gmx:100782541 755.362