Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03955 ATGGAACCTCTCAACTGCATACTCCTCTTTCTCATCACCTTCATCTTCCTCAAATTCCTCCACTCCCTTGTCACAAAACAACACAACCTCCCACCAGGTCCACAAGGTCTCCCCATCATAGGCAACCTCCATCAACTAGGCCAAAAGCCTCATCAAACCCTAGCCACACTCTCCAAAACTCATGGTCCAATAATGACCCTAAAACTAGGCCAAATAACCACCATAGTTATGTCCTCGTCACAAACCGCTAAGTCAGTCCTTCAAATCAACGACCAACATCTCTCTAACAGAACTGTCCGTGATGCAATGAGAGGTGCTAACCACCATAACTACAGTTTACCGTTCCTCCCTCTAAGTCAACGCTGGAAAGACCTAAGAAAAATCTGTAACAACTTATTATTCTCTAACAAAAACCTTGACTCCAATCAAACACTCAGACACAACAAGCTTCTAGAACTATCAAACGATATATACGAAAGTGCAGCGAAATTCGAAGCTGTTAATATCGGAAGATTAGCTTTTAAAACTACCATAAACATGTTGTCGAATACGATTTACTCAGTTGATTTGATTCCGTCGAGTGATAAAGCTGGTGAGTTTAAGGAGATAGTTACTAATATTATGAAGGAAGTTGGAAGAGCTAATGTTGCTGATTGTTTTCCTGTGTTGAAGATTTTGGATCCTGTTGGTATTAGAAGAAGAACCGGTGAGTATTTTGGGAAGTTGTTGGATGATTTTAGAGGGTTGGTTGATGAAAGGTTGAAGATGAGAGAGTTGAAGGGCTATTATGGTAAAAGTGATATGTTGGATACTATGCTTAATGATGAGAATAAAAATGGTGATAAGTACGAAGATAAGATTGAACGTTTATCAGTGGACTTATTTGTGGCAGGAACTGACACAGTGACTTCAACAGTAGAATGGGCAATGGCTGAATTACTTCACAACCCAAATGTTATGTCAAAAGCAAAATCAGAGATAAACCAACTTATTGGCAAAGGAAACTTAGTTCAAGAATCAGACATAGCAAATCTCCCTTACTTACAAGCAATAGTAAAAGAAACATTCAGATTACACCCAGCAGTTCCACTTTTACTACCAAGAAAAGCTGAAATTGATTTAGAGATAAATGGCTATAAAGTCCCAAAAGGTGCACAAGTGTTGGTGAATGTTTGGGCTATTGGGAGGGATCCAAGTTTATGGGACAATCCAAATGAGTTTTTACCTGAGAGATTTTTAGGGTCAGATATTGATTTTAAAGGTAGAAATTTTGAGTTGATACCTTTTGGTAGTGGGAGAAGAATTTGTCCTGGTTTACCTTTGGCTATAAGGGTGATGTTTTTGATGTTGGGTTTGTTTATTAATTGTTTTGATTGGGAACTTGAGGGTGGAATCAAACCTCAGGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAAGCTCAACCTTTGCTAGCTGTTCCAATTAAAGTAAGCAATAGTTGA 1491 0.3836 MEPLNCILLFLITFIFLKFLHSLVTKQHNLPPGPQGLPIIGNLHQLGQKPHQTLATLSKTHGPIMTLKLGQITTIVMSSSQTAKSVLQINDQHLSNRTVRDAMRGANHHNYSLPFLPLSQRWKDLRKICNNLLFSNKNLDSNQTLRHNKLLELSNDIYESAAKFEAVNIGRLAFKTTINMLSNTIYSVDLIPSSDKAGEFKEIVTNIMKEVGRANVADCFPVLKILDPVGIRRRTGEYFGKLLDDFRGLVDERLKMRELKGYYGKSDMLDTMLNDENKNGDKYEDKIERLSVDLFVAGTDTVTSTVEWAMAELLHNPNVMSKAKSEINQLIGKGNLVQESDIANLPYLQAIVKETFRLHPAVPLLLPRKAEIDLEINGYKVPKGAQVLVNVWAIGRDPSLWDNPNEFLPERFLGSDIDFKGRNFELIPFGSGRRICPGLPLAIRVMFLMLGLFINCFDWELEGGIKPQDMNMDDKFGLTLEKAQPLLAVPIKVSNS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03955 496 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 CDD CYP76-like 58 490 - -
Vivi4g03955 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 492 - -
Vivi4g03955 496 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vivi4g03955 496 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 Coils Coil 273 293 - -
Vivi4g03955 496 FunFam Cytochrome P450 76C4 23 489 - -
Vivi4g03955 496 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03955 496 Gene3D Cytochrome P450 17 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03955 Vivi-Chr4 160373055 160375423 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03955 8 492 Cytochrome P450 AT2G45550 46.386 2.22e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03955 - - lja:Lj2g3v0039250.1 656.366