Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03930 ATGTCAGAATCAAACGCTATAGCAAATGGTTTGGCTGGTGCTGGTGGTGGAATCATTGCTCAAATCATCACTTATCCACTTCAAGCTGTAAATACACGGCAACAAACTGAGAGAACGTTACTCAAGAAGAACAAGCAAAGTTTGGTTCCTCAATCTTCTTCCAGTGGAATAGTCACTCCTTCTTCTTCTGGATTTTTTCTTCAAATTTTTCAGGTTATTGGAAATGAAGGTTGGGGTGGACTCTATAGTGGTCTCAAACCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGAATTTATTACTTCTTCTATCAAATCTTCAAGAACAAGGCTGTGGCTATTGCAGCTGCAAGGAAAGTCAAAGGGCATGGAGATGGTACTGTTGGAATGTTTGGTTGGCTCATCGTGGCTGCTATTGCTGGATCCTTGAATGTTTTGTTCACAAACCCAATATGGGTTCTAGTGACTCGTATGCAGACACATACTCAAGCAGAAAGAAAAATCATGGACGAAAAGAAAGAAGCTTTAAGGAAAGCAGCTTCTGCATATAGCCTATCAGGTTCGACATTGGAAAACAAATTAGCAGAACTGAATTCTACAAAACCCCGACCATTTGGAACTGTACATGCAGCTAATGAAGTATATAATGAAGCCGGTATAGTTGGATTTTGGAAGGGTGTCATCCCTGCTCTAATTATGGTATGCAATCCATCTATCCAGTTTATGATTTATGAGAGTTCGTTAAAGCATCTAAGGGCGAAACGTTCTGCTAAGAAGCAGGGGGATACAACTGTAACTGCTTTGGAGGTCTTTTTGGTGGGAGCATTAGCAAAACTTGGAGCTACTGTCACAACATATCCATTGCAAGTTGTCAAGTCGAGGCTTCAAGCAAAGCAAGAGATTGGTGGAAATAACTCATTAAGATACTCAGGTACATTTGATGCAATTCTTAAAATGATCCGGTACGAAGGTTTTCGAGGTTTTTATAAGGGAATGAGTACAAAGATAGTACAGAGTGTATTTGCTGCTTCTGTATTGTTCATGATAAAGGAGGAACTTGTTAAGGCTATCATGGTTCTGGCAAATAAGAGAAGAAAAGTTGTATTAAAATATGAGTAG 1116 0.3978 MSESNAIANGLAGAGGGIIAQIITYPLQAVNTRQQTERTLLKKNKQSLVPQSSSSGIVTPSSSGFFLQIFQVIGNEGWGGLYSGLKPSLLGTAASQGIYYFFYQIFKNKAVAIAAARKVKGHGDGTVGMFGWLIVAAIAGSLNVLFTNPIWVLVTRMQTHTQAERKIMDEKKEALRKAASAYSLSGSTLENKLAELNSTKPRPFGTVHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRSAKKQGDTTVTALEVFLVGALAKLGATVTTYPLQVVKSRLQAKQEIGGNNSLRYSGTFDAILKMIRYEGFRGFYKGMSTKIVQSVFAASVLFMIKEELVKAIMVLANKRRKVVLKYE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03930 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 249 IPR018108 -
Vivi4g03930 371 Pfam Mitochondrial carrier protein 4 108 IPR018108 -
Vivi4g03930 371 Pfam Mitochondrial carrier protein 127 251 IPR018108 -
Vivi4g03930 371 Pfam Mitochondrial carrier protein 264 356 IPR018108 -
Vivi4g03930 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 355 IPR018108 -
Vivi4g03930 371 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 360 IPR044712 GO:0006862|GO:0055085
Vivi4g03930 371 SUPERFAMILY Mitochondrial carrier 5 351 IPR023395 -
Vivi4g03930 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 109 IPR018108 -
Vivi4g03930 371 Gene3D Mitochondrial carrier domain 3 358 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03930 Vivi-Chr4 159898221 159901894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03930 71 356 Chloroplast and Mitochondria Gene Families AT2G47490 28.669 6.08e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03930 K13354 - gmx:100777898 573.933