Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03928 ATGGCCTTGTTTGAGTATATTTCATTCTTTGTAGCAATTCTCTTCATAATATTATACAATATATGGAGACGCAACAAAAATGTTCCTATACCAAATTGGCCAATCATTGGCATGCTACCATTAGTTTTACATAACCTATCCAATATTCATGATTTTATAACCTTAGGTTCCAAATATTATGGAAGCACTTTTCATTTTAAAGGACCTTGGTTCACAAACATGGCCAATATTATCATCACCACTGACCCTATGAATGTGCACCACATCACTAGCAAGAAATTCACCAACTATGGAAAAGGTACTGATTTTCATGAGATTTTTGAAATTCTTGGTGATGGTATTTTCAATTTGGATTCCATTGAATGGAAGCAAGAGAGAGCAGTACTTCATTCATTACTCAAAAACAAAAGTTTTATGATATCCCTTCAACAAAACATTCAAAAGAAATTAGATAATTGTCTATTACCACTTATTGATCAAGCATCTAAAGGTGGTGAAATACTTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGATATTACGTGCACTTCGTCTTTTGGATTTGATCCTAATTGCCTTCCTTACAATTTCAATGAGTTATCAGAGATAGCTTATGTAAAAGCTATTTCTGTGCTTGAGGATACATTATTGTATAGGCACTGTATTCCAAAATGTATTTGGAAGCTACAAAGATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGGTAGCTCAACAAAACCTTCACCAATTTCTGTCCAAATGTATAGCTATCTCCAAAGATATGGATGAAAGTCATTCATGCTTGCTAAAGGAACTAATAATGAAGGAAGGCTTGCGGAAGGAGGAGATGGTTAAGAATGAGAAGTATATTAGAGACACTGCTGTCAATCTCTTGGGTGCAGGAAATGGAACAATCAGTGCTGGTTTGAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTAATGTGGAAGCTAAAATCATTCAAGAGATCAAAGATAATTGTGAAAACCAAGAGGTGGATTTCATCACTAACCTAAGTGCTGAAAAACTTGATAAGCTTGTGTACCTTCATGGAACTATATGTGAATCCTTGAGGCTCTATCCTGTTATACCATTTCAGCACAAATGTCCAATCAATTCTGATATACTACCTAGTGGAGACCATGTTAGTGCAAATACAAAGTTGATATATTCTTTGTATGCAATGGGAAGGAGGAAAGAAATATGGGGAGATGATTGCATGAAATTTAAGCCTGAGAGATGGATATCAGATAGAGGAGAGATTATACATGTACCTTCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATATCAGCTTTGTTCAAATGAAAATGGTTGCTTCTGCTATGTTATGGAAGTTTCATATACATGTTGTGGAAGGTCATTCTGTTGCTCCAAGGGTTTCTATTGTTCTTCGCATGAAACATGGATTTAAGGCCAAACTCACCAAAAGAATCATTTGA 1509 0.3532 MALFEYISFFVAILFIILYNIWRRNKNVPIPNWPIIGMLPLVLHNLSNIHDFITLGSKYYGSTFHFKGPWFTNMANIIITTDPMNVHHITSKKFTNYGKGTDFHEIFEILGDGIFNLDSIEWKQERAVLHSLLKNKSFMISLQQNIQKKLDNCLLPLIDQASKGGEILDLQDILERFTFDITCTSSFGFDPNCLPYNFNELSEIAYVKAISVLEDTLLYRHCIPKCIWKLQRWLQIGQEKKNKVAQQNLHQFLSKCIAISKDMDESHSCLLKELIMKEGLRKEEMVKNEKYIRDTAVNLLGAGNGTISAGLSWFFWLVSTHPNVEAKIIQEIKDNCENQEVDFITNLSAEKLDKLVYLHGTICESLRLYPVIPFQHKCPINSDILPSGDHVSANTKLIYSLYAMGRRKEIWGDDCMKFKPERWISDRGEIIHVPSYKFIAFNAGPRSCLGKDISFVQMKMVASAMLWKFHIHVVEGHSVAPRVSIVLRMKHGFKAKLTKRII 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03928 502 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vivi4g03928 502 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 SUPERFAMILY Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03928 502 PANTHER CYTOCHROME P450 21 494 - -
Vivi4g03928 502 CDD CYP86A 64 493 - -
Vivi4g03928 502 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03928 Vivi-Chr4 159801728 159803395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03928 1 500 Cytochrome P450 AT2G23180 41.586 1.72e-148 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03928 - - cam:101494575 665.996