Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03923 ATGGCTAGTTGTGGGAGGGAAGGTGTGGTGAGACAATATGTAAGATCGAAAGTTCCTCGTTTGAGATGGACACCAGAACTTCATCGTTGCTTTGTTTATGCCATTGAAACTCTTGGTGGTCATCAAAAGGCTACTCCTAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTTACAATTTCACATGTCAAAAGCCATTTGCAGATGTATAGGAGCATGAGAAATGACTCATGTAATAACCAAGATAGGACTATACCCGTACATAAAAGACAATCTTTTCAAGAGAATGATGATGGTTTTGGAAATGAATCTATTGGAAAGGAATCTGATTCCCTCTTTAGCTACACAAATTTCTCCCCAAAAAGAGCTAGAATCGAGAAGAAAAGTTCATTCTCAGGAATCTTAGAATGCAGGGAAAGTTTATGTGAAGCAGTTCCAAATCCATACACAAGATTCTATGATTATGTGCATGACATGGTTCAGGAACAGCAGAAAGGAATAAAGAACATTTGTGTTGATGGTTCAATATGGAAGATCACTCCTGAACCACAATATTGCAAAATGCTACCAAAACAAGAAACTCATTTGCTTAAGGTTACAAAGTTAAGTGAAAAAAAGAATGTGAATGAAAAGAGTGTACGTGCAGAAGAAGAAGGTTGTGAATTGTCATTGTCAATTTCATTGCCTCAAAAAAATAATGATGTGAGAGACTCTGGATTTAGTAACTATATGGGTTGTTCTACTGTCCAAAACAGAATTAATTTGGATCTATCTTTGGCCATTTGA 786 0.3664 MASCGREGVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRNDSCNNQDRTIPVHKRQSFQENDDGFGNESIGKESDSLFSYTNFSPKRARIEKKSSFSGILECRESLCEAVPNPYTRFYDYVHDMVQEQQKGIKNICVDGSIWKITPEPQYCKMLPKQETHLLKVTKLSEKKNVNEKSVRAEEEGCELSLSISLPQKNNDVRDSGFSNYMGCSTVQNRINLDLSLAI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03923 261 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 114 IPR046955 GO:0003700
Vivi4g03923 261 FunFam Myb family transcription factor 17 75 - -
Vivi4g03923 261 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Vivi4g03923 261 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Vivi4g03923 261 Gene3D - 18 75 - -
Vivi4g03923 261 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
Vivi4g03923 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03923 Vivi-Chr4 159672800 159674869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03923 1 74 G2-like Transcription Factor Family AT1G14600 72.152 2.27e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi4g03923 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03923 - - vvo:131600111 535.413