Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03895 ATGAGTTTGTTTGAGTACATTTCATTATTTGTAGCCATTCTCTTCATCATATTCTACAATATATGGAGACGCAACAAAAATGTTCTTATACTCAATTGGCCAATCATTGGCATGCTACCATTAGTTTTGCGTAATCAATCCAATATTCATGATTTTATGACCAAAGGTTCAAAACATTATGGAAGCACTTTTCATTTTAAAGGACCTTGGTTCACAAACATGGCCAATATTATCATCACCACTGACCCTATGAATGTGCACCACATCACTAGCAAGAAATTCAGCAACTATGGAAAAGGTACTGATTTTCATGATATTTTTGATGTTCTTGGTGATGGTATTTTCAATTTGGATTTCGATGAATGGAAGCAAGAGAGGGCGCTACTTCTTTCATTACTCAAAAAGAAAAGTTTTATGATATCCCTTCATCAAATCATTCAAAAGAAGTTAGAGAGCTGTCTATTACCACTTCTTGATCAAGCATCTAAAGGTGAACAAATACTTGATTTACAAGATATTCTTGAAATGTTCGCCTTCGATATTACTTGCACTTTGTCATTTGGATTTGATCCTAATTGCCTTCCTTGCAATTTCAATGAGTTATCAGAGATCGCTTATGTAAAAGCTATTTCTGTGATTGAGGATACATTATTGTATAGGCACTGTCTTCCAAAATGTATTTGGAAGCTTCAAAGATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGATAGCTCAAAAAAATCTTCATGAATTCCTGTCCAAATGTATAGCCAATTCCATAAGTGATGAGGACAGAAGAAGATTGAGAAGCGGTGAAGATGTGAATGAAAGTCATTCATGCTTGCTAAAGGGGCTAATAATAAGGGAAGGCTTGGAAAAGGAGGAAATGCTTAAGAATGAGAAGCATATTAGAGACACTACACTCAATCTCTTGGGTGCAGGAAATGGAACACTAAGTGCTGGTTTGAGTTGGTTGTTTTGGCTTGTTTCAACTCATCCCAATGTGGAAGCTAAAATCATTCAAGAGATCAAAGATAATTGTGAAAACCAAGAGGAGGATTTCATCACTAACTTAAGTTTTGAAAAACTTGATAAGCTAGTGTACCTTCATGGAACTATATGTGAAACCTTGAGGCTCTATCCTAGTATACCTATTGACCACAAATGTTCAATCAACTCTGATATACTACCTAGTGGAGACCATGTTAGACCAAATACAAAGTTATTATATTCTTTGTATGCAATGGGAAGGATGAAAAAAATATGGGGAGATGATTGCATGGAATTTAAGCCAGAGAGATGGATATCAGATAAAGGACAGATTATACATGTACCATCTTACAAGTTCATAGCATTCAATTCAGGTCCAAGAAGTTGTGTTGGAAAAGATATTAGCTTTGTTCAAATGAAAATGGTTGTTTCTGCTATGTTATGGAAGTTTCAGATACATGTTGTGGAAGGTCATTCGGTAACTCCAAGGGTTTCTATGATTCTTCGCATGAAATATGGACTAAAGGTCAAACTCACAAAAAGAATCATTTGA 1545 0.3521 MSLFEYISLFVAILFIIFYNIWRRNKNVLILNWPIIGMLPLVLRNQSNIHDFMTKGSKHYGSTFHFKGPWFTNMANIIITTDPMNVHHITSKKFSNYGKGTDFHDIFDVLGDGIFNLDFDEWKQERALLLSLLKKKSFMISLHQIIQKKLESCLLPLLDQASKGEQILDLQDILEMFAFDITCTLSFGFDPNCLPCNFNELSEIAYVKAISVIEDTLLYRHCLPKCIWKLQRWLQIGQEKKNKIAQKNLHEFLSKCIANSISDEDRRRLRSGEDVNESHSCLLKGLIIREGLEKEEMLKNEKHIRDTTLNLLGAGNGTLSAGLSWLFWLVSTHPNVEAKIIQEIKDNCENQEEDFITNLSFEKLDKLVYLHGTICETLRLYPSIPIDHKCSINSDILPSGDHVRPNTKLLYSLYAMGRMKKIWGDDCMEFKPERWISDKGQIIHVPSYKFIAFNSGPRSCVGKDISFVQMKMVVSAMLWKFQIHVVEGHSVTPRVSMILRMKYGLKVKLTKRII 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03895 514 CDD CYP86A 64 505 - -
Vivi4g03895 514 SUPERFAMILY Cytochrome P450 19 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PANTHER CYTOCHROME P450 21 507 - -
Vivi4g03895 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 Pfam Cytochrome P450 32 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03895 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vivi4g03895 514 Gene3D Cytochrome P450 15 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03895 Vivi-Chr4 158840726 158842580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03895 1 512 Cytochrome P450 AT2G23180 40.421 6.60e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03895 - - cam:101494575 635.95