Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03894 ATGATGATATATATATATATATATATATATATATATATATTCTTCATCATATTCTACAATATATGGAAACGCAACAAAAATGTTTTCATACCAAATTGGCCAATCATTGGCATGCTGCCATCAGTTTTACTTAATCTATCCGATATTCATGATTTTATGACCTTAGGTTGCAAACATTGTGGAAACACTTTTCATTTTAAAGGACCTTGGTTCACAAACATGGCCAACATTATCCTCACTTGTGATCCCATGAATGTGCAGTACATCACCAGCAAGAATTTCAGCAACTATGGGAAAGGATCTGATTTCCGTGAGATGTTTGAGTATTTCGGCGTTGGTATTTTTAATTTGGAATCCAATGAATGGAAACAAGAGAGGGAACTACTTCACTCATTGCTAAAAAGGAAAAGCTTTGAGATTTTTCATCAAAATAACATTCAAAAGAAGCTAGAGTATTGCCTATTACCATTTCTTGAGCATGCATATAAAGGTGTACAGGTAATTGATTTACAAGATATTTTTGAGAGGTTCACCTTTGACACCGCATGTACCTTTTTATTTGGATTTGATCCAAATTCTCTTCCTTACGACTTCAATGGATTTTCAGATGTTTCTCATGTAAAAGCTTTTTCTGTGCTTGAGGATACGATATTGTTCAGACACTGTATTCCAAAATATTTGTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGGTAGCTCAACAAAATCTTCACCAATTCTTGTACAAATGTATAGATCGTTGTAAAGGTGTTGAAGAGAACAGAAGATTGAGACGCAGTGATGAAGATATTGATGAAAGTGATTCTTGCTTACTAAAAGAAATAATTAGGCAAGGATTGGAAAAGGGTGAAATGTTTGAGAAGTATTATCTTAGAGACACTGCACTTGATCTCTTGAGTGCGGGAAGTGGAACAATTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTGGAAGCTAAAATTGTTAAAGAGATCAAAGATAACTATTTAGTACAAGAGGAGAATTTCATCGCAAATTTGAGTATGGAAGAGCTTGGTAAGCTAGTTTACCTTCACGGAGCTATATGTGAAGCCTTAAGGCTTTATCCACCTGTATCATTTGAGCACAAGTGTGCAATAAAAGCTGATATACTACCTAGTGGAGACCATGTTAGTGCAAATACAAAGGTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGATGACTGCATGGAATTTAAGCCAGAGAGATGGATATCAGAAAAAGGACAGATTATACATGTACCATCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTATTGGAAAAGGTATTAGCCTTATTCAAATGAAAATGGTTGCAGCTACTATGTTATGGAAGTTTCACATACAAGTTGTGGAATCTCACGCAGTAACTCCAAGGACTTCTTTTAAGCTACGCATGAAACATGGCTTAAAGATCAAAGTCACTAAAAGATACATTGAGTATTGA 1548 0.3508 MMIYIYIYIYIYIFFIIFYNIWKRNKNVFIPNWPIIGMLPSVLLNLSDIHDFMTLGCKHCGNTFHFKGPWFTNMANIILTCDPMNVQYITSKNFSNYGKGSDFREMFEYFGVGIFNLESNEWKQERELLHSLLKRKSFEIFHQNNIQKKLEYCLLPFLEHAYKGVQVIDLQDIFERFTFDTACTFLFGFDPNSLPYDFNGFSDVSHVKAFSVLEDTILFRHCIPKYLWKLQKWLQIGQEKKNKVAQQNLHQFLYKCIDRCKGVEENRRLRRSDEDIDESDSCLLKEIIRQGLEKGEMFEKYYLRDTALDLLSAGSGTISSGLSWFFWLVSTHPIVEAKIVKEIKDNYLVQEENFIANLSMEELGKLVYLHGAICEALRLYPPVSFEHKCAIKADILPSGDHVSANTKVIYSLYAMGRMEQIWGDDCMEFKPERWISEKGQIIHVPSYKFIAFNAGPRSCIGKGISLIQMKMVAATMLWKFHIQVVESHAVTPRTSFKLRMKHGLKIKVTKRYIEY 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03894 515 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 Gene3D Cytochrome P450 12 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 SUPERFAMILY Cytochrome P450 19 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vivi4g03894 515 Pfam Cytochrome P450 31 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03894 515 PANTHER CYTOCHROME P450 17 505 - -
Vivi4g03894 515 CDD CYP86A 64 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03894 Vivi-Chr4 158816683 158818450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03894 2 511 Cytochrome P450 AT2G23180 40.462 1.45e-141 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03894 - - cam:101494575 703.36