Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03893 ATGATCTTGTATCAATACATTTTATTGTTTCTAGCCATTATCTTCCTCATATTCTACAAAATATGGAGGCGCAACAAAATTGTTATTGTTCCAAATTGGCCAATAATTGGCATGCTACCATCACTTCTCCTTTATCTATCCAATTTTCATCATGTTTTAACCTTAGGTTCCAAACAATATGGAAGCACTTTTCATTTTAAAGGACCTTGGTTCACAAACATGGCCAACATTATCATCACTTGTGATCCAATGAATGTGCACCACATCACCAGCAAAAATTTCAGCAACTATGGGAAAGGAACTGATTTCCGTGAGATTTTTGATGTTTTCGGCGTTGGTATATTTAATTTGGATTCCAATGAATGGAAAAAAGAGAGAGCACTACTTCATTCGTTGGTAAAAAGGAAAAGCTTTGAGATTTTCCATCAAAATAATATTCAAAAGAAGCTAGAGAATTGTCTATTACCATTTCTTGATCATGCATGTAAAGGTGTACAAGTAATTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGACATCGCCTGTACCTTTCTATTTGGATTTGATCCAAATTCCATTCCTTACCACTTCAATGAATTTTCAGATGCTGCTTATGTAAAAGCTATTTCTGTGATTGATGATACACATTTGATCAGACACTGTATTCCAAAATGTATTTGGAAGGTACAAAAATGGCTACAAATAGGTCAAGAAAGGAAGAGAAAGGTAGCTCGAGAAAATCTTTACCGATTCTTGTACAAGTGTATAGCATATTCGGAAGGCGATGAAGGAAAAAATGTTGTGGAAGAATATCATCCATGCTTACTAAAAGAATTAATGAAAAGGGACTTGGGAGACGACGAAATGGCCGAGAAGTATTATCTTAGAGACACTGCACTCAATCTATTGGCTGCAGGAGATGGACCAATTAGTTCAGGTCTCACTTGGTTCTTTTGGCTAGTTTCAACTCATCCTATTGTGGAAGCTAAAATCATTCAAGAAATCAAAGATAACTATTTTACACAAGAGGAGAATTTGATTACTGAGTTACGTGTCGAAGAGCTCGATAAGCTAGTTTACCTTCATGGAGCAATATGTGAAGCCTTAAGGCTTTATCCTCCTGTTCCATTAGAGCACAAGTGTGCAGTCAAATCTGATGTACTACCTAGTGGACACCATGTTAGTGCAAATACGAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGATGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGAGAGATTATACATGTACCATCATACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTATTGGGAAAGGTATTAGCCTTATTCAAATGAAAATGGTTGCAGCTGCTATGTTATGGAAGTTTCACATACATGTTGTGGAAAATCAATCTGTAACACCAAAGATTTCTGTTGTTCTTCGCATGGAACATGGCCTTAAGGTCAAAGTTAGTAAAAGATGCATTTGA 1521 0.3609 MILYQYILLFLAIIFLIFYKIWRRNKIVIVPNWPIIGMLPSLLLYLSNFHHVLTLGSKQYGSTFHFKGPWFTNMANIIITCDPMNVHHITSKNFSNYGKGTDFREIFDVFGVGIFNLDSNEWKKERALLHSLVKRKSFEIFHQNNIQKKLENCLLPFLDHACKGVQVIDLQDILERFTFDIACTFLFGFDPNSIPYHFNEFSDAAYVKAISVIDDTHLIRHCIPKCIWKVQKWLQIGQERKRKVARENLYRFLYKCIAYSEGDEGKNVVEEYHPCLLKELMKRDLGDDEMAEKYYLRDTALNLLAAGDGPISSGLTWFFWLVSTHPIVEAKIIQEIKDNYFTQEENLITELRVEELDKLVYLHGAICEALRLYPPVPLEHKCAVKSDVLPSGHHVSANTKLIYSLYAMGRMEQIWGDDCLEFKPERWISDRGEIIHVPSYKFIAFNAGPRSCIGKGISLIQMKMVAAAMLWKFHIHVVENQSVTPKISVVLRMEHGLKVKVSKRCI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03893 506 SUPERFAMILY Cytochrome P450 19 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vivi4g03893 506 Gene3D Cytochrome P450 15 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 CDD CYP86A 64 497 - -
Vivi4g03893 506 PANTHER CYTOCHROME P450 21 499 - -
Vivi4g03893 506 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03893 506 Pfam Cytochrome P450 31 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03893 Vivi-Chr4 158767267 158769030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03893 8 504 Cytochrome P450 AT2G23180 42.323 5.66e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03893 - - cam:101494575 694.115