Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03892 ATGGCCTTGTTTGAGTATATCACTTTATTTGTAGTCATTCTCTTCATCATAATTTTATATATATGGAGATGCAACAACAATGTTCTTATACCAAATTGGCCAATCATTGGCATGCTACCATCAGTTTTGCATAATCAATCCCATATTCATGATTTTGCAACTTTAGTTGTGAAACATCATGGAGGAACTTTTCATTTCAAAGGACCTTGGTTCACAAACATTGCCACCTTTATCCTCACTAGTGATCCCATGAATGTGCACCACATCACCAGCAAGAATTTCATCAACTATGGGAAAGGGTCTGATTTCCATGACATATTTGAAAACATCGGTGTTGGCATTTTCAATTTGGATTTCAACGAATGGAAGCAAGAGAGAACACTACTTCATTCATTGCTCAAAACAAAAAGTTTTGAGATATCCCTTCAACAAATAATTCAACAGAAGCTGGAGAATTGGCTATTACCATTTCTCGATCATCATGCATCAAACGGTGTACAAGTACTTGATTTACAAGATATTCTTGAGAGGTTTACCTTTGATATAAGTTGCTCTTTTATATTTGGTATTGATCCCATTTGCCATCCTTACAATTTCAATGAAGTCTCAGATATTGCTTGTGTAAAAGCTATTTCTGTGATTGAGGATACAATGTTGTATAGGCACTATACTCCAAAACATATTTGGAAGTTACAAAAATGGCTTCAAATTGGTCAAGAGAAGAAAGGCAAGGTAGCTCAACAAAATTTTGAACAATTCCTGTCCAAATGTATAGCTACTTTCAAAGGTGATGAAGAGAATAGAAGATTGATAAGCAGTGAAGATGTGGACGAAAGTCGTACATGCTTGCTAAAGGAACTAATAATGAAGGGAGGCTTGGGAAAGGATGAAGTGGTTGAGAATGAGAAGTATATTAGTGACACTGCAGGAAATCTCTTGAGTGCAGGAAGTGGAACAATTAGTTCAGCTCTCAGTTGGTTGTTTTGGCTTGTTTCAACTCATCCTATAGTGGAAGCTAAAATCATTCAAGAGATCAAAGATAAGTATTTAGCAGCACAAGAGGAGAATTTCATCACAAATTCAAGTATGGATGACCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAACCTTAAGGCTTTATCCTCCTGTTCCATTTGTGCACAAGTGTGCAGTCAAATCTGATATACTACCTAGTGGAGACCATGTTAGTGCAAATACAAAGGTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAAACGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGAGAGAATATACATGTGCCGTCTAACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATGTTACCTTAGTTCAAGTGAAAATGGTTGCAGCTGCTATGTTATGGAAGTTTCATATATATGTTGTGGAAGGTCAATCTGTAACTCCAAGGGTTTCTGCTGTACTTCGCATGAAACATGGTTTTAAGGTTAAAGTCAGTAAAAGAAGCATATGA 1551 0.3649 MALFEYITLFVVILFIIILYIWRCNNNVLIPNWPIIGMLPSVLHNQSHIHDFATLVVKHHGGTFHFKGPWFTNIATFILTSDPMNVHHITSKNFINYGKGSDFHDIFENIGVGIFNLDFNEWKQERTLLHSLLKTKSFEISLQQIIQQKLENWLLPFLDHHASNGVQVLDLQDILERFTFDISCSFIFGIDPICHPYNFNEVSDIACVKAISVIEDTMLYRHYTPKHIWKLQKWLQIGQEKKGKVAQQNFEQFLSKCIATFKGDEENRRLISSEDVDESRTCLLKELIMKGGLGKDEVVENEKYISDTAGNLLSAGSGTISSALSWLFWLVSTHPIVEAKIIQEIKDKYLAAQEENFITNSSMDDLDKLVYLHGAICETLRLYPPVPFVHKCAVKSDILPSGDHVSANTKVIYSLYAMGRMEQIWGNDCLEFKPERWISDRGENIHVPSNKFIAFNAGPRSCLGKDVTLVQVKMVAAAMLWKFHIYVVEGQSVTPRVSAVLRMKHGFKVKVSKRSI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03892 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vivi4g03892 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 CDD CYP86A 64 507 - -
Vivi4g03892 516 PANTHER CYTOCHROME P450 19 509 - -
Vivi4g03892 516 Gene3D Cytochrome P450 20 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 Pfam Cytochrome P450 31 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 SUPERFAMILY Cytochrome P450 19 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03892 516 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03892 Vivi-Chr4 158745570 158747133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03892 1 515 Cytochrome P450 AT2G23180 42.176 1.23e-138 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03892 - - cam:101494575 694.886