Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03891 ATGGACTTGTTTGAGTATATCACTTTATTTGTTGTCATTCTCTTCACCATAATCTATTATATATGGAGATGCAACAAAAATGTAGTTATACCAAATTGGCCTATAATTGGCATGCTACCATCAGTTTTGCATAATCAATCCCATATTCATGACTTTGCAACTTCAGTTTTGAAACATCATGGAGGCACTTTTCATTTCAAAGGACCTTGGTTCACAAACAGTGCCAATTTTATCTTCACTAGTGATCCCATGAATGTGCACCACATCACTAGCAAGAAGTTCAACAATTATGGGAAAGGGTCTGATTTCCATGAGATTTTTGAAATTCTCGGTGTTGGTATTTTCAATTTGGATTCCGATGAATGGAGGCAAGAGAGAAACCTACTTCATTCATTGCTCAAAACAAAAAGTTTTGAGATATCCCTTCAACAAAACATTCAGCAGAAGCTAGAGAATTTCCTCTTACCACTTATCGATCATCACGCGACCAAAGGTATACGAGTACTTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGATATAATCTGCACTTCTTTATTTGGTTTTGATCCCATTTCCCTTCCTAACAAATTCAATGAATTCTCGGATATCGCTTATGTATCAGCTATTTCTGTGATTGAGGATATGATATTGTTGAGGCACTATACTCCAAAACGTATTTGGAAGGTACAAAAATGGATACAAATTGGTCAAGAGAAGAGAGGTAAGGTAGCTCTAGAAAATCTTCACCGATTCTTGTCCAAATGCATAGATCAATGCAAAGGTGATGAAGATGTTGATGAAAGTCATTCTTGCTTACTAAAAGAAATAATCAAGCAAGGATCGGAAAAGGGCGAAATTGCTGATAGATACATTCGAGACACTGCAGTTAATCTCTTGGTTGCTGGAAATTCAACAATTAGCACAGGTCTCGTTTGGTTCTTCTGGCTTGTTTCAACTCATCCTACGGTGGAAGCTAAAATTATTCAAGAGATAAAAAATAATTGTTTAACACAAGAGGAGAATTTGGTTACTAATCTAAGTGTAGAAGAATTTGATAAACTAGTTTACCTTCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTCTAGCATTTCAACACAAGTGTGCCATAAAATCTGATAAACTACCTAGTGGAGACCATGTTAGTGCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAAATGATTGCTTGGAGTTTAAGCCAGAGAGATGGATATCAGATAGAGGAGAGATTATACACGTGCCGTCTTACAAGTTCATAGCATTCAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGATGTTAGCTTTGTTCAAATGAAAATGGTTGCAGTTGCCATGTTATGGAATTTTAATATACAGGTGGTGGAAGGTCATTCTGTAGCTCCAAGGGTTTCTTTTATGCTTCGTATGAAACATGGACTTAAGGTAAAAGTCAGTAAAAGATGCATTTGA 1512 0.3624 MDLFEYITLFVVILFTIIYYIWRCNKNVVIPNWPIIGMLPSVLHNQSHIHDFATSVLKHHGGTFHFKGPWFTNSANFIFTSDPMNVHHITSKKFNNYGKGSDFHEIFEILGVGIFNLDSDEWRQERNLLHSLLKTKSFEISLQQNIQQKLENFLLPLIDHHATKGIRVLDLQDILERFTFDIICTSLFGFDPISLPNKFNEFSDIAYVSAISVIEDMILLRHYTPKRIWKVQKWIQIGQEKRGKVALENLHRFLSKCIDQCKGDEDVDESHSCLLKEIIKQGSEKGEIADRYIRDTAVNLLVAGNSTISTGLVWFFWLVSTHPTVEAKIIQEIKNNCLTQEENLVTNLSVEEFDKLVYLHGAICEALRLYPPLAFQHKCAIKSDKLPSGDHVSANTKLIYSLYAMGRMEQIWGNDCLEFKPERWISDRGEIIHVPSYKFIAFNAGPRSCLGKDVSFVQMKMVAVAMLWNFNIQVVEGHSVAPRVSFMLRMKHGLKVKVSKRCI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03891 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 Gene3D Cytochrome P450 16 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PANTHER CYTOCHROME P450 18 496 - -
Vivi4g03891 503 Pfam Cytochrome P450 31 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 SUPERFAMILY Cytochrome P450 19 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03891 503 CDD CYP86A 64 494 - -
Vivi4g03891 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03891 Vivi-Chr4 158729363 158730874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03891 12 501 Cytochrome P450 AT2G23180 43.195 1.27e-142 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03891 - - cam:101494575 708.368