Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03889 ATGGCCTTGTTTGAGTATGTTTCATTATTTGTAGCAATTCTCTTCATAATATTATGGAGACGCAACAAAAATGTTCTTATTCCAAATTGGCCAATCATTGGCATGCTACCATCAGTTTTGCATAATCAATCCCATATTCATGATTTTGTAACCTCAGTTTTAAAACATCATGGAGGTACTTTTCTTTTCAAAGGACCTTGGTTCACAAACATTGCCAATTTTATCTTCACTAGTGATCCCATGAATGTGCACCACATCACCAGCAAGAATTTCACCAACTATGGAAAAGGTACTGATTTTCATGAGATTTTTGAAATTCTTGGTAATGGTATTGTCAATTCGGATTCCGATGAATGGAAACAAGAGAGGGCACTACTTCATCCATTACTCAAAAATAAAAGTTTTATGATATTCCTTCAACAAACCGTTCAAAAGAAGTTAGAGAACTGTCTATTACCATTTCTTGATCAAGCATCTAAAGGTGGTCAAATACTTGATTTACAAGATATTCTTGAGACGTTCACCTTTGATAATATTTGCACTATCTCGTTTGGATTTGATGCAAATTGCTTTCCTTACAATTTCAACGAGTTATCAGAGATAGCTTATGTAAAAGCTGTTTCTGTGCTTGAGGATACAATATTGTTGAGGCACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAAAACAAGGTAGCTCAACAAGATCTTCACCAATTCTTGTCCACATGTATAGCTAACTCCAAAGCTCATGAAGAGAAGAGAAGATTGAGAAGCAGTGAAGATGTGGATGAAAGTCATTCATGCTTGCTAATAAAACTAATAATGAGGGAAGGCTTGGAAAAGGAGGAGATCATTAAGAATGAGAAGTATGTTAGAGACACTGCAGTCAATCTCTTGGGTGCAGGAAATGGAACAATCAGTTCAGGTTTGTGTTGGTTCTTTTGGCTTCTTTCAAATCATCCTAATGTGGAAGCTAAAATCATTCAAGAGATCAGAGATAATTGTGAAAACCAAGAGGAGGATTTCATCACTAACTTAAGTTTTGAAAAACTTGATAAGCTTGTGTACCTTCATGGGGCTATATGTGAAGCCTTGAGGCTTTATCCACCTGTACCATTTGAGCACAAGTGTGCTAGAAAAGATGATATACTACCTAGTGGAGATCTTGTTAGTCCCAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAAGATATATGGGGAGATGATTGCTTGGAATTTAAGCCAGAGAGATGGATATCAGATAGAGGACAGATTATACATGTACCATCTTACAAGTTTATAACATTCAATGCAGGCCCAAGAAGTTGTTTGGGAAAAGATATTAGCTTTGTTCAAATGAAAATGGTTGCTTCTGCTATGTTATGGAAGTTTCAGATACATGTTGTGGAAGGTCATTCTATAACTCCCAGGGTCTCTGTTGTTCTTCGCATGGAACATGGCTTTAAGGTCAAACTCACAAAAAGAATCATTTAA 1536 0.3587 MALFEYVSLFVAILFIILWRRNKNVLIPNWPIIGMLPSVLHNQSHIHDFVTSVLKHHGGTFLFKGPWFTNIANFIFTSDPMNVHHITSKNFTNYGKGTDFHEIFEILGNGIVNSDSDEWKQERALLHPLLKNKSFMIFLQQTVQKKLENCLLPFLDQASKGGQILDLQDILETFTFDNICTISFGFDANCFPYNFNELSEIAYVKAVSVLEDTILLRHYIPKCIWKLQKWLQIGQEKKNKVAQQDLHQFLSTCIANSKAHEEKRRLRSSEDVDESHSCLLIKLIMREGLEKEEIIKNEKYVRDTAVNLLGAGNGTISSGLCWFFWLLSNHPNVEAKIIQEIRDNCENQEEDFITNLSFEKLDKLVYLHGAICEALRLYPPVPFEHKCARKDDILPSGDLVSPNTKLIYSLYAMGRMEDIWGDDCLEFKPERWISDRGQIIHVPSYKFITFNAGPRSCLGKDISFVQMKMVASAMLWKFQIHVVEGHSITPRVSVVLRMEHGFKVKLTKRII 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03889 511 PANTHER CYTOCHROME P450 19 504 - -
Vivi4g03889 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Vivi4g03889 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 Gene3D Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 Pfam Cytochrome P450 28 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03889 511 CDD CYP86A 61 502 - -
Vivi4g03889 511 SUPERFAMILY Cytochrome P450 17 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03889 Vivi-Chr4 158712417 158714164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03889 1 509 Cytochrome P450 AT2G23180 40.499 1.79e-147 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03889 - - cam:101494575 697.197