Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03888 ATGTTGTATAGGCACTGTATTCCAAAATGTATTTGGATGCTACAAAGATGGCTACAAATTGGTCAAGAGAAGAAGAACAAGATAGCTCAACAAATCCTTCACCAATTTCTGTCCAAACGTATAACTAAATCCAAAGATATGGAAGAAAGTCATTCATGCTTGCTAAAGGAACTAATAATGAAGGGAGGCTTGGAAAAGGATGAAATGGTTGAGAATGAGAAGTATATTAGAGACGCTGCAGTTAATCTCTTACTTGCAGGAAATGGAACAATTAGTTCAGGTCTCTGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTAATGTGGAAGCTAAAATCATTCAAGAGATCAAAGATAATTGTGAAAATCAAGAGGAGGATTTCATCACATACTTAAGTGTGGAAAAGCTTGATAAGCTGTTGTACCTTCATGGAGCAATATATGAAACAATGAGGCTTTATCCTACTGTACCATTACATCACAACTGTGCAAATAAATCTGATGTACTACCTAGTTGA 516 0.3585 MLYRHCIPKCIWMLQRWLQIGQEKKNKIAQQILHQFLSKRITKSKDMEESHSCLLKELIMKGGLEKDEMVENEKYIRDAAVNLLLAGNGTISSGLCWFFWLVSTHPNVEAKIIQEIKDNCENQEEDFITYLSVEKLDKLLYLHGAIYETMRLYPTVPLHHNCANKSDVLPS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03888 171 PANTHER CYTOCHROME P450 2 171 - -
Vivi4g03888 171 SUPERFAMILY Cytochrome P450 4 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03888 171 Pfam Cytochrome P450 7 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03888 171 Gene3D Cytochrome P450 3 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03888 171 PRINTS E-class P450 group I signature 95 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03888 171 PRINTS E-class P450 group I signature 143 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03888 171 PRINTS E-class P450 group I signature 75 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03888 Vivi-Chr4 158688219 158688734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03888 3 171 Cytochrome P450 AT1G57750 38.418 3.11e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03888 - - vvo:131598186 356.295