Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03875 ATGGATTCTCAAAATTTTGACTTATTAGCACTTGTCTCCTTTTTTCTCATCATTCTTGTGGCACTCAAAACTGGGAGGAATCTCAAGAAAAAAGGCTCATCTCTTCCAAACCTACCCCCAGGACCATGGAAGTTACCTATTATAGGACACATACACCATCTAGTGACCTCTACACCACATAGAAAATTAAGAGACTTGGCCAAAGTTCATGGACCCTTGATGCAACTACAACTTGGAGAGATCTTTGCAATTGTTGTTTCCTCACCAGATTATGCTAGGGAGGTACTTAAAACACATGATGTTGTATTTGCATCTAGGCCTAAGATTGTATCTATGGACATAATATCATATGGATGCACAGATATTGCATTTTCACCTTATGGAAATTACTGGAGACAGCTGCGAAAAATATGTAAAATGGAGCTTTTAACTCAAAAACGTGTTGGTTCGTTTAGGCCAATAAGGGAAGAAGTGCTTACAAGTCTCATCAAAAGGATTGATTCACAGCAAGGGTCATCCATCAACATCACTCAGCTTGTGGTTTCGTCGACATTTGCTATCATTACAAAGGCTGCATTTGGCAAGGAATGCAGAGTCCAAGAAGAGCTTGCGTCTTTGGGAAATGGAGAATCGGTTGGAGGAGGTTTTGACATAGCGGAACTGTTTCCGTCTGCTAAATGGCTTCAACTTGTTTCTGGTTTGAGGCCAAAACTTGAGAGGTTGCATAGACAAATTGATGAGTTACTAGAAAAGGTCATCATTGAACATAAAGAAGCAAAGTCAAAAGTAAAAGAAGGCCAAGGTGAAGTAGACGAAGATCTAGTCGATGTTCTTCTAAAGTTTCAAGGTGGTAATGATAGTGATGAAGATATATGCTTAACTGACAACAACATCAAAGCTATAATCCTGGACATTTTTGGTGCTGGAGGCGATACATCAGCTTCTACCATAGTTTGGGCAATGTCAGAGTTGATAAAGGATCAAAGAGTGATGAAGAAAGCACAAGATGAAGTGAGAGAAATCTTCAACATGAGAGGAAATATTGGTGAAAACTATATAAATGAACTAGAATATTTGAAGTCTATTGTGAAAGAGACATTAAGATTACACCCTCCAGCTCCTCTTTTGCTTCCAAGAGAATGTGGACAAGCATGTGAGATAGATGGGTATCATATACCAATCAAAACCAAAGTAATAGTCAATGCATGGGCAATCGGAAGAGATCCTAAGTACTGGATTGAACCAGAGAGGTTCTATCCAGAAAGATTCATCGGTAGCTCTATTGATTATAAAGGGAGTAATTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGAATGTGCCCGGGCATCACATTCGGTCTGATAAATGTTGAGCTAGCCCTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGGTGAGGATTTGGACATGACTGAGCAATTTGGAGCTAGCATCAAAAGAAAACATGACTTGTATTTGATACCCACTTCTCCTCTTCCTTCTGTTGTAAGCTAA 1533 0.3927 MDSQNFDLLALVSFFLIILVALKTGRNLKKKGSSLPNLPPGPWKLPIIGHIHHLVTSTPHRKLRDLAKVHGPLMQLQLGEIFAIVVSSPDYAREVLKTHDVVFASRPKIVSMDIISYGCTDIAFSPYGNYWRQLRKICKMELLTQKRVGSFRPIREEVLTSLIKRIDSQQGSSINITQLVVSSTFAIITKAAFGKECRVQEELASLGNGESVGGGFDIAELFPSAKWLQLVSGLRPKLERLHRQIDELLEKVIIEHKEAKSKVKEGQGEVDEDLVDVLLKFQGGNDSDEDICLTDNNIKAIILDIFGAGGDTSASTIVWAMSELIKDQRVMKKAQDEVREIFNMRGNIGENYINELEYLKSIVKETLRLHPPAPLLLPRECGQACEIDGYHIPIKTKVIVNAWAIGRDPKYWIEPERFYPERFIGSSIDYKGSNFEYIPFGAGRRMCPGITFGLINVELALAFLLYHFDWKLPNGMKGEDLDMTEQFGASIKRKHDLYLIPTSPLPSVVS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03875 510 Gene3D Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 CDD CYP71-like 70 497 - -
Vivi4g03875 510 PANTHER OS08G0105600 PROTEIN 62 504 - -
Vivi4g03875 510 Coils Coil 238 258 - -
Vivi4g03875 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vivi4g03875 510 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03875 510 FunFam Cytochrome P450 71D8 31 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03875 Vivi-Chr4 158299058 158301141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03875 5 502 Cytochrome P450 AT3G26300 41.506 1.78e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03875 - - gmx:102665189 746.117