Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03865 ATGGCATCATCATCAGAACCAAAACAATCTTCCACCACCAAGAACAACGACAACCACCTCCCACTAAAACAAATCCCTGGCAGCTATGGCCTCCCTTTCATCGGACCGATCTTCGACCGACACGATTATTTCTATAACCAAGGAAGAGACAAATTCTTCTCAACAAGAATCCAAAAATACAATTCAACAATCTTCAGAACCAACATGCCACCAGGTCCATTCATTTCCTCAAACCCAAGAGTCATTGCACTCTTGGACGCAGCTTCCTTCCCGATCCTCTTCGACAACAAAAAAGTCGAGAAACACAACGTCTTCGACGGTACCTTCATGCCGTCGACAAACTTCACCGGTGGCTACCGTGTGTGTGCACAGTTAGACACAACTGAACCTAACCATGCTCTTATCAAAGGTTTCTTTCTTAATCAACTTTTGTTAAGGAAAGACTCTTTTATCCCTCTATTTAGAAGCATACTCTCTGAAGCTTTTAATGAGATTGAAGAAGGGCTTTCTGGTAAAAGTGGTAAAGCGGATTTTAATACTATTTTTAGTGTGGCTTCGTTTAACTTCATGTTTCGGCTTTTTTGTGATAATAAGGATCCTTCTGAAACTAAACTTGGTTCTCAAGGTCCTAAAATGTGTGATACATGGATTCTCTTTCAACTTTTTCCAATTGAAACCCTAAAGCTTCCAAAGATTTTCAATTATCTTGAAGATCTCTTGCTACGTACTCTTCCCTTTCCTGCTTGTTTGACAAGCTCCTCTTACAAGAAACTCTACGAAGCATTTTCTTCTTCAGCTGTAACACTTTTAAACGAAGCAGAAAAAGCAGGATTGAAAAGATCCGAAGCATGTCACCAGCTCATTTTCATAGCTTGTTTCAACTCATACGGAGGATTCAAGAATCAATTCCCAACACTCTTCAAATTGGTTGGTTTAAGCGGCCAAGAGCTACACAGAGAACTCGCAACCGAGATAAGAACTATCGTAAAACAAGAAGGAGGAGTAACAATTCAGGCATTGGAAAAAATGCCTTTAGTAAAATCTGTTGTTTATGAAACTATGCGGATTGAACCGATTGTTCGATATCAATATGCAAAAGCAAGAGAGGATTTGATTGTGGAGAGTCATGATGCTGCTTTTGAAGTTAAGAAGGGTGAGATGTTATTTGGATACCAATCTTTTGCTACTAAGGATCCTAGGATTTTTGATGATGCTGAGGTTTTTGTTCCTAAGAGGTTTGTTGGAGAAGGTGAAAAGTTGTTGAAGTATGTTTTGTGGTCGAATGGGAAAGAAACAGATGAACCTTCTGTGGATAATAAGCAGTGTCCTGGGAAGAATCTTGTTGTGCTTTTGTGTAGATTGTTCTTGGTTGAGTTTTTCTTGCGTTATGATACTTTTACTTTTGAGACTAAAGAAGCTGTTGTTGGTGTTTCTATTACCATTACTTCACTCACCAAGGCTTCTACTACCTGA 1473 0.3931 MASSSEPKQSSTTKNNDNHLPLKQIPGSYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTIFRTNMPPGPFISSNPRVIALLDAASFPILFDNKKVEKHNVFDGTFMPSTNFTGGYRVCAQLDTTEPNHALIKGFFLNQLLLRKDSFIPLFRSILSEAFNEIEEGLSGKSGKADFNTIFSVASFNFMFRLFCDNKDPSETKLGSQGPKMCDTWILFQLFPIETLKLPKIFNYLEDLLLRTLPFPACLTSSSYKKLYEAFSSSAVTLLNEAEKAGLKRSEACHQLIFIACFNSYGGFKNQFPTLFKLVGLSGQELHRELATEIRTIVKQEGGVTIQALEKMPLVKSVVYETMRIEPIVRYQYAKAREDLIVESHDAAFEVKKGEMLFGYQSFATKDPRIFDDAEVFVPKRFVGEGEKLLKYVLWSNGKETDEPSVDNKQCPGKNLVVLLCRLFLVEFFLRYDTFTFETKEAVVGVSITITSLTKASTT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03865 490 CDD CYP74 55 482 - -
Vivi4g03865 490 PANTHER CYTOCHROME P450 26 20 463 - -
Vivi4g03865 490 MobiDBLite consensus disorder prediction 1 22 - -
Vivi4g03865 490 SUPERFAMILY Cytochrome P450 20 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03865 490 PRINTS E-class P450 group IV signature 380 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03865 490 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03865 490 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03865 490 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03865 490 FunFam Allene oxide synthase, chloroplastic 20 489 - -
Vivi4g03865 490 Pfam Cytochrome P450 315 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g03865 490 Gene3D Cytochrome P450 16 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03865 Vivi-Chr4 158164152 158167246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03865 2 488 Cytochrome P450 AT5G42650 50.612 1.01e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03865 K01723 - gmx:100801764 735.717