Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03859 ATGGCTCACCATTATTCTAATAAGGTCTTAGGTTGTTTTCTTTTGTTTTCTTTAACCTTAACTTATGGCCATAGTCATTTTCTCATAGATCCAATAATTATTCCTGGATATGAAGTTTCACCAGGACATGATATTGGTGATGGTGATGCTCCAGCTCAATCACCCGAGCCGTTCGTCGGCGATTCTCCAGCTCAATCACCCGAGCCGTTTATCGATGATTCTCCCGCTCCTTCGCCTGAAAATGAAAATGTTGACAAAAGTTTTCCTAATGAGAGACTAAAACATTCTTATGTTGCATTTCAAGCATGGAAAAAGGCTATTTATTCTGACCCTTTTAACACAACTGGTAATTGGGTTGGTCATGATGTTTGTTCCTACAATGGTGTGTTTTGTTCTCCTGCTCTTGATGATCCTACACTGAATGTTGTTGCTGGTGTTGATATTAATCACGCCGATATCGCCGGTCACCTTCCGGAAGAGTTAGGACTATTGAATGATACTTCTCTTTTCCATATTAACTCAAACAGGTTCTGTGGTATAATTCCGGATAGCTTTGAGAATCTAACCATAATGTACGAGTTTGATATCAGTAACAACCGCTTCGTCGGCGATTTTCCTTTAGTGGTTTTGAAATGGAAAAATTTGACCTACTTGGATATTAGATTCAATGATTTTGAAGGAGTTTTACCTCATGAGCTATTTGAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCACATATACCAGAAACACTTGGAAAATCAACAGCCTCTGTTGTGACTTTTGCAAACAATAACTTTACAGGTTGTATTCCAAAATCAATTGGAAACATGCGGAACTTGAATGAGATTGTGTTCTTAGGAAATGATCTTGGTGGTTGTTTTCCTCAAGAGATTGGTTTGTTAGGGGAAGTAACAGTTTTGGATGCTAGCAAAAATGGGTTTGTTGGGACACTACCAAACTTAGCAGGGTTGAAGAATGTTGAGGTTATTGACATAGCACATAACAAGTTTAGTGGATATGTTTCCAACACTATTTGTCAACTACCTACTTTGAAGAACTTTACATTTTCTTATAATTACTTTAATGGAGAAGCACAAACTTGTGTTCCTTCAGATAGTTGTTCTGTTGAGTTGGATGATGCAAAAAATTGTTTACCTGGAAGGAAGAATCAAAAGACATCTAAACAATGTTTACCTGTTTTGACTAAACCTGTGGATTGTAGCAAGAACTGTGGTGGAGGAAAAGGAAAGAGTCATGATCCATCAGAGCCTAAACCAACTCCATCAAATCCATCAAAATCTCATCCTCCTAAGGTGGAGACACCAGAGGCTAAGCCACCACCAACTCCAAAGGCTCAAACACCACAAATTCCACCGACACTTCCACCGGTTGAGGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCACCACCACCGGTTAAGCACATTCCACCTATGTTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGTATTCCACCTATGCTACCACCAGTTGAAGATATCCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGTATTCCACCTATGCTACCACCAGTTGAAGATATCCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGTATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCTCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTTTTCACCACCCCCACCGGTTGAGCGCATTCCACCTATGCTACCACCAGTTGAAGATATTCCACCAACCGTTGCACCAGTGTCATCACCACCACCGGTTGAGAAAATCCCGCCCATGCTACCACCAGTTGAAGATATTCCACCAATCGTTGCACCAGTGTCATCACCACCACCACCTGCTCAAGTCAACTCACCACCACCACCAGTTCACTCTCCTCCACCACCCTCACCAGCCCATTCCCCACCTCCACCAGTCAACTCTCCACCACCACCACCAGTGTACTCCCCTCCTCCACCCTCGCCAGTCCACTCTCCCCCTCCACCAGTTTATTCTCCACCACCACCAGTCCATTCTCCACCACCACCAGTTCATTCTCCTCCACCACCTCCGATTTACTCTCCCCCACCACCAATTCACTCTCCACCCCCACCAGTCCATTCACCACCACCTCCAGTTCATTCTCCACCCCCACCAGTCCATTCTCCACCACCTCCAGTTAACTCCCCACCCCCACCAGTTCATTCTCCTCCTCCACCGGTCTACTCACCACCACCACCACAGGTGCATTCTCCACCACCACCGGTCAACTCACCTCCACCACCAGTACACTCACCTCCTCCTACCCCCGTCAACTCACCTCCACCACCAGTATACTCACCTCCTCCTACCCCCGTCAACTCACCTCCACCACCAGTACACTCCCCTCCTCCTCCCCGGGTCAACTCACCACCACCACCAGTACACTCGCCTCCTCCACCGGTCAATTTACCATCACCACCAAAATGGGATGACATCACACTACCACCAAACATTGGAGCTGAATATAGGTCACCTCCTCCTCCAACAATTGCTGGATACTAA 2709 0.4633 MAHHYSNKVLGCFLLFSLTLTYGHSHFLIDPIIIPGYEVSPGHDIGDGDAPAQSPEPFVGDSPAQSPEPFIDDSPAPSPENENVDKSFPNERLKHSYVAFQAWKKAIYSDPFNTTGNWVGHDVCSYNGVFCSPALDDPTLNVVAGVDINHADIAGHLPEELGLLNDTSLFHINSNRFCGIIPDSFENLTIMYEFDISNNRFVGDFPLVVLKWKNLTYLDIRFNDFEGVLPHELFEKELDAIFLNNNRFTSHIPETLGKSTASVVTFANNNFTGCIPKSIGNMRNLNEIVFLGNDLGGCFPQEIGLLGEVTVLDASKNGFVGTLPNLAGLKNVEVIDIAHNKFSGYVSNTICQLPTLKNFTFSYNYFNGEAQTCVPSDSCSVELDDAKNCLPGRKNQKTSKQCLPVLTKPVDCSKNCGGGKGKSHDPSEPKPTPSNPSKSHPPKVETPEAKPPPTPKAQTPQIPPTLPPVEDIPPTVAPVSSPPPPPPVKHIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVFSPPPPVERIPPMLPPVEDIPPTVAPVSSPPPVEKIPPMLPPVEDIPPIVAPVSSPPPPAQVNSPPPPVHSPPPPSPAHSPPPPVNSPPPPPVYSPPPPSPVHSPPPPVYSPPPPVHSPPPPVHSPPPPPIYSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPPPVYSPPPPQVHSPPPPVNSPPPPVHSPPPTPVNSPPPPVYSPPPTPVNSPPPPVHSPPPPRVNSPPPPVHSPPPPVNLPSPPKWDDITLPPNIGAEYRSPPPPTIAGY 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03859 902 PRINTS Proline rich extensin signature 523 539 - -
Vivi4g03859 902 PRINTS Proline rich extensin signature 460 476 - -
Vivi4g03859 902 PRINTS Proline rich extensin signature 485 497 - -
Vivi4g03859 902 PRINTS Proline rich extensin signature 553 570 - -
Vivi4g03859 902 PRINTS Proline rich extensin signature 441 453 - -
Vivi4g03859 902 PRINTS Proline rich extensin signature 502 523 - -
Vivi4g03859 902 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 96 394 - -
Vivi4g03859 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 67 567 - -
Vivi4g03859 902 MobiDBLite consensus disorder prediction 429 495 - -
Vivi4g03859 902 MobiDBLite consensus disorder prediction 413 495 - -
Vivi4g03859 902 SUPERFAMILY L domain-like 100 371 - -
Vivi4g03859 902 MobiDBLite consensus disorder prediction 637 902 - -
Vivi4g03859 902 Gene3D Ribonuclease Inhibitor 96 394 IPR032675 -
Vivi4g03859 902 MobiDBLite consensus disorder prediction 43 87 - -
Vivi4g03859 902 MobiDBLite consensus disorder prediction 637 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03859 Vivi-Chr4 157946146 157949052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03859 83 415 Trihelix Transcription Factor Family AT3G19020 68.263 5.75e-173 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03859 - - vvo:131634815 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03859 4 157946146 157949052 Vivi4g03859 4 157946146 157949052 ECH