Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03811 ATGGTATTTTCCGGTAAGCATGGCTGGGAAGACACCAAAGGCTTCACCCTGCAAGTCCTAACAGGGAGGTGGTTCATGGTGTTTTCATCATTTATGATCATGTCGGTGTCTGGAGCAAGCTACATGTTTGGTCTTTACTCAAGAGAAATAAAGTCAGTTTTGGGATATGACCAAACTACTCTCACTCTTTTAAGCTTCTTCAAGGACTTAGGTTCTAACATAGGCATTCTTTCAGGTCTTCTCAATGAGGTCACACCCCCTTGGGTTGTCTTATCAATTGGTGGTGTTCTAAACTTTTTTGGCTATTTCATGATTTGGCTTGCAGTCACAAAAAAAATCCCCAAACCTCCAATATGGAATATGTGCTTATACATATTCATTGGAGCCAATTCTCACTGTTCAACCAACACTGGTGCTTTAGTCACAAGTGTGAAGAACTTCCCTGGTAGTAGAGGTGTTGTCATAGGCCTTTTGAGTGGTTACCTTGGTTTGAGTGGAGCTATCATGACTCAGCTATACTATGCCTTCTATGGAAGTGACTCTAAATCTTTGATTTTGCTTATGGCTTGGCTACCAACTGCTGTAACTTTTGTTTTCATGCCTGTTATTAAACACCACAAAAGTACTGAACAGCCAAATGATTCCAAAGCTTTCTATAATTTCCTTTACATGACTCTAATCCTTGCAGGGTTCCTCATGATAATGATCATAGTGCAAAAGTGTTTCAACTTTACTAAGAGTGAGTACTGTGTCACTACCTTTGTGATGCTTCTCTTGCTTATCCTGCCTCTTGTTGTTTCTATCATGGAAGAACAAAGGATTTGGAAGAGCAAGAAAGAGAACATCAATCCTCCTAAGCCTTTGAATATAATCACACAGACTCAACAAGTTAACGGAGAAGAGAGTACTCAAAATCAAAACACGCGTAGAGGTGAAGATCATACAGTACTTGGAGCCGTTTTCAGCCTTGACATGATGACTCTTTTTGTAGCCACAATTTGTGGACTTGGTGGAACCCTTACTGTGGTAAACAACTTGAGTCAGATTGGATTATCTTTAGGATATCCTGCACAAAGTATAACCACTTTTGTTTCACTGATGGCAATTTGGATCTATCTAGGTAAAGTTACACAGGGAGTTATCGCGGAATTTATCATAATAAAGCTAAAACTCCCTAGACCTCTCATCCTCACAGGGATCCTTATACTGTCTTGTTTTGGTCACCTTCTAATTGCATATGATGTACCAAATGGTCTCTATGTAGCTTCAATTATTCTTGGTTTCTGCTTTGGAGCAAACTGGCCAGTACTATTTTCGATCATATCTGAATTATTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTCAATAGCAAGTCCAATAGGGTCATACTTGTTAAGTGTGAGGGTTGCTGGTTATCTGTATGACAAGGAAGCCAGAAAGCAAATGGCAGCATTAGGACTAACGAGGAAGCATGGGGAGGAGTTGAATTGCAATGGAGGTCAGTGCTACAAATTGGCTTTCATTATAATCACTGCTGTTAGCCTCTTTGGGGCACTTGTGTCTCTAACTTTAGTTTATAGGACTAGAGATTTTTATAGAGGTGACATATACAAGAAGTTCAGAGAGGAAGGTAGAAATAATGAAAATGAATTGGCTGTAACTCAGCACAAGGTTGGACCTGCCTCAGATGATGGATAG 1707 0.3972 MVFSGKHGWEDTKGFTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQTTLTLLSFFKDLGSNIGILSGLLNEVTPPWVVLSIGGVLNFFGYFMIWLAVTKKIPKPPIWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGVVIGLLSGYLGLSGAIMTQLYYAFYGSDSKSLILLMAWLPTAVTFVFMPVIKHHKSTEQPNDSKAFYNFLYMTLILAGFLMIMIIVQKCFNFTKSEYCVTTFVMLLLLILPLVVSIMEEQRIWKSKKENINPPKPLNIITQTQQVNGEESTQNQNTRRGEDHTVLGAVFSLDMMTLFVATICGLGGTLTVVNNLSQIGLSLGYPAQSITTFVSLMAIWIYLGKVTQGVIAEFIIIKLKLPRPLILTGILILSCFGHLLIAYDVPNGLYVASIILGFCFGANWPVLFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGYLYDKEARKQMAALGLTRKHGEELNCNGGQCYKLAFIIITAVSLFGALVSLTLVYRTRDFYRGDIYKKFREEGRNNENELAVTQHKVGPASDDG 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03811 568 Gene3D MFS general substrate transporter like domains 211 491 IPR036259 -
Vivi4g03811 568 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 538 - -
Vivi4g03811 568 SUPERFAMILY MFS general substrate transporter 213 533 IPR036259 -
Vivi4g03811 568 CDD MFS_Mch1p_like 22 521 - -
Vivi4g03811 568 Pfam Nodulin-like 23 268 IPR010658 -
Vivi4g03811 568 SUPERFAMILY MFS general substrate transporter 10 205 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03811 Vivi-Chr4 157227452 157229493 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03811 13 546 Nodulin-like Gene Family AT2G39210 60.612 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03811 - - gmx:100789645 816.994