Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03807 ATGTCTCGCCCTATTGAGCCATTGAAAGAGATCAATGATTCAAAAGATTTGTGGAAGATCGCTGTTAGATGCAAACATCTATGGACTGTCACAAGTTCTTCAAACAAAGAACACATGGAGATGGTTTTGGTTGATTCTAAGCGTGATATGATTCAGGCTGTTGTCCCTGCTTATTTGCTTTCCAAATTCAAATCTCAAATTGAAACAGGAAACTCTTATATCATGCAAAATTTTAAAGTTGGGAGGAATGATTTTGCTTTTAAGTCGACAAATCATACGTACAAATTGGTTTTTTGTGGGTCAACTTCTGTTAAGAATGCAGAATTTCCTGACATCCCTCATAACTACCTTAACATTATTGCTTTGAATTCCATAGTTGAAGGAAGGTTTCAATCAAATGTTTTGGTTGATTTGATTGGAGGAATCACTGATATCACTCAAACCCAAGTTAACGGTGACAACAACAACAACAACAGAATAGTTTTTTCAATTGTAGATGCCAGCAAAACAGTTGTACAATGTACTCTTTGGGGCCAACTTGCAGTTCAGCTATATGAGTATTATAAGAATAATAAGCAAGCATCAAATATTGTCATTGTTCTAATCAATGCAAGGGTTAAAGAGGCTCAAGGAGGATTTCCAGTTAGTGTTTCCAACACATGGAATGGAACGAAACTGTTGATTAATGACCTTGCTATTGAGGAAGTCAAGAGTCTAAAAGAAAGACTTGGTGTTGATTTGCCTTTGTTATCATCTTCAAGTGTACAAGTTGAGACGACGCAAAACTCATTTTATTCTGACTATGACAAATTTGTTTGGAAGGCTGAAATAATGAGTCTCTCTGAGATAACAAATCTGCAACATGAAACAACCTGTGTTACCGTTGCTACCCTCGATAAGTTTGATGCTGGGCAAATGGGGTGGTACTATGATGGATGTGTGGAATGTACAAGGAGTGTGACTGCCAAGGATGGAAAGCTGAAGTGTTTTAAGGATCATATTAGCCCAGAACCTGTGCCACGGTATAAGCTTGATATAACAGCTGTTGACGGCAGTTCGAAGGCAAAGTTCGTCTTTTGGGACACAGACTGCGTGAAGTTAATTGGGAAGTCTGCTCTTCAAATGAATATGGATTTAACACAGTCTGTTGATTACGATCCACTTGAGTTCCCTTACGAACTTGACTCCATATTGGCAAAAGAATTGGCAATTAGAGCTGTTTATCAGCCTAAAAATGGGAGACTTTCTGTCATTGGCTTCAAGACTGATGAAGATGTGCGTAATAAAATTAAGGAGAGTTTCAAATTTGAAGAGGAACCTCTATCTGCATCTGCAGAAAATGATCTGAGCATTGAAAATTCAGGACTCACTCCATGTAAGAGACTTATGAATGATGCAGTAGAAGATAATGATAGTGTACAACAATCATCAACAAAGATGGCCAAAGATATTAAACCGGAGAAATAG 1467 0.377 MSRPIEPLKEINDSKDLWKIAVRCKHLWTVTSSSNKEHMEMVLVDSKRDMIQAVVPAYLLSKFKSQIETGNSYIMQNFKVGRNDFAFKSTNHTYKLVFCGSTSVKNAEFPDIPHNYLNIIALNSIVEGRFQSNVLVDLIGGITDITQTQVNGDNNNNNRIVFSIVDASKTVVQCTLWGQLAVQLYEYYKNNKQASNIVIVLINARVKEAQGGFPVSVSNTWNGTKLLINDLAIEEVKSLKERLGVDLPLLSSSSVQVETTQNSFYSDYDKFVWKAEIMSLSEITNLQHETTCVTVATLDKFDAGQMGWYYDGCVECTRSVTAKDGKLKCFKDHISPEPVPRYKLDITAVDGSSKAKFVFWDTDCVKLIGKSALQMNMDLTQSVDYDPLEFPYELDSILAKELAIRAVYQPKNGRLSVIGFKTDEDVRNKIKESFKFEEEPLSASAENDLSIENSGLTPCKRLMNDAVEDNDSVQQSSTKMAKDIKPEK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03807 488 SUPERFAMILY Nucleic acid-binding proteins 118 250 IPR012340 -
Vivi4g03807 488 Gene3D - 2 106 IPR012340 -
Vivi4g03807 488 MobiDBLite consensus disorder prediction 466 488 - -
Vivi4g03807 488 Pfam Domain of unknown function DUF223 40 135 IPR003871 -
Vivi4g03807 488 PANTHER OS03G0429900 PROTEIN 10 436 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vivi4g03807 488 SUPERFAMILY Nucleic acid-binding proteins 276 407 IPR012340 -
Vivi4g03807 488 CDD RPA1_DBD_B_like 137 243 - -
Vivi4g03807 488 Gene3D - 268 429 IPR012340 -
Vivi4g03807 488 SUPERFAMILY Nucleic acid-binding proteins 4 106 IPR012340 -
Vivi4g03807 488 CDD RPA1_DBD_A_like 19 104 - -
Vivi4g03807 488 Gene3D - 110 245 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03807 Vivi-Chr4 157131446 157133811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03807 1 376 Core DNA Replication Machinery Family AT5G08020 23.308 5.04e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03807 - - vvo:131658312 791.571