Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03806 ATGGAATGGTCTTTCACTCCATTCCAGAAGCTTAACTTCAACATCAACAACGTGGTTTCAAAGTTGTCGGATTCAAATATCGTCGGAAAGGGTTGCTCAAGCGTTATTTACTGCGTAGAGACTCCGACAAAACAGATGAGGCATAAAAATATAGTAAGACTTTTAGGATGCTGCAACAATGGAGGAACTAGATTGTTGTTGTTTGATTACATGTGTAATGGAAGTTTGTTTGGATTGCTCCATGAAAAGAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAAAAGCTCATGGTTTGGAATATCTTCATCATGATTGTATCCCTCTAATCGTCCATCGCAACATTAAGGCTAACAACATCTTGGACGGTCCACAGTTCGAAGCTTTTCTTGCAGATTTCGGCCTTGCAAAATTGGTCACTTCCTCGGACTGCTCAAGATCCTCGCATGTAGTTGCAGGTTCTTACGGATACATAACTCCAAGTTTGGTGAAACTATAA 510 0.402 MEWSFTPFQKLNFNINNVVSKLSDSNIVGKGCSSVIYCVETPTKQMRHKNIVRLLGCCNNGGTRLLLFDYMCNGSLFGLLHEKRLFLDWDARYKIILGKAHGLEYLHHDCIPLIVHRNIKANNILDGPQFEAFLADFGLAKLVTSSDCSRSSHVVAGSYGYITPSLVKL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03806 169 ProSiteProfiles Protein kinase domain profile. 1 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03806 169 Gene3D Transferase(Phosphotransferase) domain 1 12 169 - -
Vivi4g03806 169 SMART serkin_6 22 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03806 169 SUPERFAMILY Protein kinase-like (PK-like) 12 165 IPR011009 -
Vivi4g03806 169 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 43 164 - -
Vivi4g03806 169 Pfam Protein kinase domain 44 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03806 Vivi-Chr4 157109868 157112871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03806 3 164 Receptor kinase-like Gene Family AT5G56040 42.640 8.08e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi4g03806 Pkinase 6.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03806 - - vvo:131595665 353.214