Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03801 ATGGTGATATCGATTGTGGAGCCTAACACTTGCATCAGGGGCTGCTGCACCAGTTCCTCTATCCCCCTCCATCTCCCTCCTTCCTCTTACTCTCTTCTCTCCCCTATTGCCAGAGGAGCTGAGAGTGTTGTCTATGAAGGCACTTTGAATGGAGACAAGGTTGCTATCAAGAAACCCGTTTTGGCACTTTCTCAACACATCAATGACTTTCATAAACAATTGCAATTGCTATGCAAGCTAGATCACCCGGGAATAGCTACACTAATTGCTGCCCATGCAAAACCACCCAATTATATGTTTTTCTTCAAATTATATGAATCTTCCAATCTTGGCCACAAGTTACATGTCGAAGAATGGGTTCCTACCGTCAATGACGCGCTTATGATCACAACGCAGTTAGCAAAGGCCTTGCAATATCTGCATAATCTCGGGATTCTTCATAGAGATGTGAAACCAGCAAATATTCTTCTTGACATAAATCTTTGTCCACGCCTCACCGATTTTGGTTTGGCAGAATACAAGAGTGATATTAAAGGAGTTTCTCTTGAGAATTGGAAATCTTCTGGAAAACCTACAGGTGGTTTCCACAAAAAGAATATGGTTGGGACACTTATTTACATGGCACCCGAAATATTAAGAAAGGAGCTACACACAGAAAAGTCAGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTTGAGATGAACTATACTGAACAACAACTAACAGCAGCAGTTGTTTCTGATGGATTACGACCAGTCCTTGCTAGCGAAGAGTTGGGTATACCATCGAGATTAATATCGATGATACAGAAGTGCTGGGATGCTAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTGAAGGAGCTTGATTTTATCATGGAACAACAGAAGGTAAAGAAGGTGGAAGATATGCATATTAGGCCTTATAACTTGCATGTTGACCATCCCGTGGACAAGACTTATCAAGAGAGTATTAACTGGTCTACTCAAGGTGAACTTTTGGTCAGAAATGCCTCTAGTGCAACTGATCCTTGTTTCAGAACGTGGGAGTCTTATGACGAGCCTTTAGCATACCGTCCAATATTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGGCTATGGAAGACACACATTTCATTCTGCCCCATCTTTGCAATGAAAAGGATGTCTATGCTTTTGGCATCTTTGATGGCCACAGAGGCGCAGCAGCTGCCGAGTTTTCTTCTAAGGCTGTACCAGCAATTTTGCAAACTTTAAGTTTTACAGACAGTCCTGCTAATACACTAGTGGAAGCCTTCGTTAGAACAGATACTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAAATCCAACAGATGTATCCAGAAGGATATGCATCCTGGTTGTACAGCAATTGCTGCTATTGTAAGTGGCAACAAGCTGTTTGTTGCTAATAGTGGTGATTGCCGGGCAATCTTATGTTGTGCTGGTAATCCCACTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGTCACGGGGGCCAAGTACATTGGCAAGTTGATACCTGGAGGGTTGGTCTTCCTGCGCTTCAGGTTACTCGTTCTATCGGCGACGATGATCTGAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAGCACACCTTATGTGCTGAGGATGAGTTTCTGGTGATGGCTAGCGATGGTCTGTGGGATGTGATGAGCAGTTTGGATGTGATAAGTATAATAACAGACACAGTTAAAGAGGCTGGCATGTGTTCTAAGAGGTTGGCTACTGAAGCTGTCGAACGTGGCAGCAAAGATAACATTACAGTTATTGTAGTTTTTTTACGACCTGTATCTACAGCTGAGAGAATTTATTAG 1959 0.4303 MVISIVEPNTCIRGCCTSSSIPLHLPPSSYSLLSPIARGAESVVYEGTLNGDKVAIKKPVLALSQHINDFHKQLQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESSNLGHKLHVEEWVPTVNDALMITTQLAKALQYLHNLGILHRDVKPANILLDINLCPRLTDFGLAEYKSDIKGVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLASEELGIPSRLISMIQKCWDANPKSRPSFDDIVKELDFIMEQQKVKKVEDMHIRPYNLHVDHPVDKTYQESINWSTQGELLVRNASSATDPCFRTWESYDEPLAYRPILSWGSYATCGRREAMEDTHFILPHLCNEKDVYAFGIFDGHRGAAAAEFSSKAVPAILQTLSFTDSPANTLVEAFVRTDTAFRKELDSYRKSNRCIQKDMHPGCTAIAAIVSGNKLFVANSGDCRAILCCAGNPTALSKDHVASCLQERERVIRHGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITEHTLCAEDEFLVMASDGLWDVMSSLDVISIITDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03801 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Vivi4g03801 652 Pfam Protein kinase domain 31 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03801 652 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 316 - -
Vivi4g03801 652 SMART PP2C_SIG_2 400 642 IPR001932 -
Vivi4g03801 652 Gene3D - 378 647 IPR036457 -
Vivi4g03801 652 FunFam Protein kinase and PP2C-like domain-containing protein 20 345 - -
Vivi4g03801 652 Pfam Protein phosphatase 2C 390 635 IPR001932 -
Vivi4g03801 652 SUPERFAMILY PP2C-like 378 644 IPR036457 -
Vivi4g03801 652 SUPERFAMILY Protein kinase-like (PK-like) 22 334 IPR011009 -
Vivi4g03801 652 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 376 646 - -
Vivi4g03801 652 ProSiteProfiles PPM-type phosphatase domain profile. 385 642 IPR001932 -
Vivi4g03801 652 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03801 652 Gene3D Transferase(Phosphotransferase) domain 1 19 339 - -
Vivi4g03801 652 CDD PP2Cc 387 642 IPR001932 -
Vivi4g03801 652 SMART PP2C_4 375 640 IPR001932 -
Vivi4g03801 652 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03801 Vivi-Chr4 156995950 157000141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03801 99 652 PP2C-type Phosphatase Gene Family AT2G40860 64.706 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Vivi4g03801 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03801 - - gmx:100785390 1088.17