Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03792 ATGGCCAAGGGTGACGATTCTCTCCTAAAAAAGAAGAACAAAAAGCTTCGAAAAAGACTAAACAGCAAAAATGACTCCACTTCCGTCTCTGCAAAGATTGGCGCTGTTATCGCCGCCAAAAAGCGCCGCAAGGCCGGAAAACGCCGCAACTGCGAGGGAATGTGCTATAGTTTACCTACTCTAGATGATCCATTCAATGATAGACGCGGGAAACCCGAATTCAAAACACGGGAGCCTGAAACCCGAAAAGAAAAGAAAGACCGTGTTAAAGGGAAGAGTGCACCCGGCAGGAAAGGTACAGTTGGTGGAAGTATTTCACGAACTGGAAATGATGCCAACAATAAAAGTTACTCAGAGGAGGAAAATGTAAAGACGAATCAGCAGCATGATAGTGAAATTTCAGATTTCCCTTCGAAATTTGTATTTTGGTGTCTGAGTGCGATTGAGAATGCACTGCGACATGATGATGCGTACACTGAGGGAGAGGGAAACTCCTTCTTTCTTGACTCATGGGGGTTAGAATTTTCGAAGTGTTTTTCTACTGGTAAAGATTTGATGGACACCAGTGGGAGCTTTGCTAGTACTGAGCAAATTGCTTGGATGGTTTCTGCGGCAGCTGATATTTTTGTTAGAAAAGAGAAACAAGGCTTATCATTAGAGACCCCCTTTCTTTTGTTCCTCGTCCCTTCTGAAAAGAAAGCTGGCCAGGTTCGAACAGTTTGCAAGCCTTTGAAATCTCTAGGAGTACATACAGTGAGTGTTCATCCTGGTGCTTCCTTAGATCATCAGATTCAAGGTCTGAAAAGTTGTGAGCCTGAGTTTCTCATTGCTACTCCTGAGAGGCTCTTGGAGCTTGTTTCAATGAAGGCAATTGATATTTCTCACGTCTCTATGCTGGTTATTGACGGGCTCAATGCTATTTGTAATGCTGGCCATGCCGATGCAATAAAATCCATCAAGAAGCTTATTTCTGGCAATCCCACTCTTGTGGTTTTCAATGATAGCAACCATACATCTATCCCAGTAGTTAGGCATCTTCTGACGAGACCTATTTGTAGAATATCTATTAATAATTCAATTGCCAGCCAAAGTTCATGCATTGTACAGTCGGTTCAAGTGTGTACATCAGATGAGGATAAACATGTTAAGAGCATTGATGTCCTATGTCAATTTTGGAGCAGCCAGACTCATAATTCAAACCTTCTATATATTTTGAGGAAGGATGTCAAGTGCAATAAATTGGTCAAGACTCTGAAATCCATGGGCTGTTCCACGTCACTTGAATCTGATGCAGCTACTATTAATGATAGTGTGGATCCAAAGAGGAGATTGGTTACAATGATTGATTTGGAAGATATCTCTACCGCGGATATAGGGATGTATGATGCAATAGTCCTACCAAGTTTTGTACCCACTATGGAAAACTATGAGCATATTTTGACAAAAATGGCCCGTCATAGTGTCAACGGCATTTTGTATGGTTTCTTAACAAAAAGCGATACAGAACATGCTGGACCACTCATCTCAATTCTTGAACAATGTGGGCAGGAAGTGCCTGAAACCCTAAAAGATCTTCATCAGTCATCAAATATGTCCGAAGATTGA 1605 0.4174 MAKGDDSLLKKKNKKLRKRLNSKNDSTSVSAKIGAVIAAKKRRKAGKRRNCEGMCYSLPTLDDPFNDRRGKPEFKTREPETRKEKKDRVKGKSAPGRKGTVGGSISRTGNDANNKSYSEEENVKTNQQHDSEISDFPSKFVFWCLSAIENALRHDDAYTEGEGNSFFLDSWGLEFSKCFSTGKDLMDTSGSFASTEQIAWMVSAAADIFVRKEKQGLSLETPFLLFLVPSEKKAGQVRTVCKPLKSLGVHTVSVHPGASLDHQIQGLKSCEPEFLIATPERLLELVSMKAIDISHVSMLVIDGLNAICNAGHADAIKSIKKLISGNPTLVVFNDSNHTSIPVVRHLLTRPICRISINNSIASQSSCIVQSVQVCTSDEDKHVKSIDVLCQFWSSQTHNSNLLYILRKDVKCNKLVKTLKSMGCSTSLESDAATINDSVDPKRRLVTMIDLEDISTADIGMYDAIVLPSFVPTMENYEHILTKMARHSVNGILYGFLTKSDTEHAGPLISILEQCGQEVPETLKDLHQSSNMSED 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03792 534 Pfam DEAD/DEAH box helicase 218 323 IPR011545 GO:0003676|GO:0005524
Vivi4g03792 534 MobiDBLite consensus disorder prediction 1 130 - -
Vivi4g03792 534 MobiDBLite consensus disorder prediction 103 121 - -
Vivi4g03792 534 MobiDBLite consensus disorder prediction 64 94 - -
Vivi4g03792 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 331 IPR027417 -
Vivi4g03792 534 Gene3D - 213 361 IPR027417 -
Vivi4g03792 534 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 13 526 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03792 225 525 Eukaryotic Initiation Factors Gene Family AT1G72730 20.317 1.64e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03792 - - gmx:100809099 672.544