Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03791 ATGTTACTACTCTGGCTCAAACTGCTCGCAGTTATCCATCTGTATAGATGCAAAGAATTGAATGAGTTCCAAGCAGAGATTTCTGTTCTTACTAAGGTTAGGCATAGACATTTGGTCGCCCTTTTGGGATATTGCATCAATGGCAATGAGAGGCTTTTGGTATATGAGCATATGCCTCAAGGTACACTAACGCATCATCTGTTTGAATGTGAGGAAAATGGTTACACTCCTTTGACATGGAAACAAAGGTTGGCAATAGCTTTGGATGTTGGACGGGGGATCGAATACTTGCACAACTTAGCTCAACAAAGCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGCAATGACATGAGAGCAAAAGTTGCAGATTTTGGGTTGGTTAAAAACGCACCTGACGGGAATTATTCTCTTGAGACAAGGTTGGCCGGAACATTTGGATATCTTGCACCCGAGTACGCAGCTACCGGAAGAGTGACAACCAAAGTGGAGGTTTACGCATTCGGAGTAGTTTTGATGGAACTGATCACAGGTAAAAAGGCATTGGACGACTCTGTGCCTGATGAAAGGTCTCATTTGGTTACATGGTTCCGAAGGGTACTCATTAACAAGGAAAACGTTCCAAAGACAATTGATCAAACTCTCAACCCAGATGAGGAAACAATGTTGAGCATATATAAAATGGCTGAGCTGGCCGGCCATTGCACCGCCCGTGAACCATATCAAAGGCCAGATATGGGGCACCCAGTTAATGTGTTGGTTCCCCTTGTGGAGCAATGGAAACCTTCTATCGATACAGACGAAAGTGGTTATGGCGTTGAGTTGAATCTTCCTCGAGCACTGCAAAGGTGGCAAGACAATGAAGGCACTTCAACATCAATGTTTAATGACTTGTCCATATTTAATCAAGACATATATTTCTCTTATTCACATTAA 945 0.4222 MLLLWLKLLAVIHLYRCKELNEFQAEISVLTKVRHRHLVALLGYCINGNERLLVYEHMPQGTLTHHLFECEENGYTPLTWKQRLAIALDVGRGIEYLHNLAQQSFIHRDLKPSNILLGNDMRAKVADFGLVKNAPDGNYSLETRLAGTFGYLAPEYAATGRVTTKVEVYAFGVVLMELITGKKALDDSVPDERSHLVTWFRRVLINKENVPKTIDQTLNPDEETMLSIYKMAELAGHCTAREPYQRPDMGHPVNVLVPLVEQWKPSIDTDESGYGVELNLPRALQRWQDNEGTSTSMFNDLSIFNQDIYFSYSH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03791 314 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03791 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Vivi4g03791 314 Gene3D Transferase(Phosphotransferase) domain 1 59 274 - -
Vivi4g03791 314 FunFam receptor protein kinase TMK1 58 275 - -
Vivi4g03791 314 Pfam Protein tyrosine and serine/threonine kinase 16 251 IPR001245 GO:0004672|GO:0006468
Vivi4g03791 314 SUPERFAMILY Protein kinase-like (PK-like) 13 265 IPR011009 -
Vivi4g03791 314 SMART serkin_6 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03791 314 Gene3D Phosphorylase Kinase; domain 1 9 58 - -
Vivi4g03791 314 PANTHER OSJNBA0070M12.3 PROTEIN 18 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03791 Vivi-Chr4 156904848 156907149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03791 22 256 Receptor kinase-like Gene Family AT5G56890 46.835 7.77e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Vivi4g03791 PK_Tyr_Ser-Thr 4.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03791 K00924 - vvo:131595659 643.654