Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03789 ATGCCTCAAGGTACACTAACGCATCATCTGTTTGAATGTGAGGAAAATGGTTACACTCCTTTGACATGGAAACAAAGGTTGGCAATAGCTTTGGATGTTGGACGGGGGATCGAATACTTGCACAACTTAGCTCAACAAAGCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGCAATGACATGAGAGCAAAAGTTGCAGATTTTGGGTTGGTTAAAAACGCACCTGACGGGAATTATTCTCTTGAGACAAGGTTGGCCGGAACATTTGGATATCTTGCACCCGAGTACGCAGCTACCGGAAGAGTGACAACCAAAGTGGAGGTTTACGCATTCGGAGTAGTTTTGATGGAACTGATCACAGGTAAAAAGGCATTGGACGACTCTGTGCCTGATGAAAGGTCTCATTTGGTTACATGGTTCCGAAGGGTACTCATTAACAAGGAAAACGTTCCAAAGACAATTGATCAAACTCTCAACCCAGATGAGGAAACAATGTTGAGCATATATAAAATGGCTGAGCTGGCCGGCCATTGCACCGCCCGTGAACCATATCAAAGGCCAGATATGGGGCACCCAGTTAATGTGTTGGTTCCCCTTGTGGAGCAATGGAAACCTTCTATCGATACAGACGAAAGTGGTTATGGCGTTGAGTTGAATCTTCCTCGAGCACTGCAAAGGTGGCAAGACAATGAAGGCACTTCAACATCAATGTTTAATGACTTGTCCATATTTAATCAAGACATATATTTCTCTTATTCACATTAA 774 0.4264 MPQGTLTHHLFECEENGYTPLTWKQRLAIALDVGRGIEYLHNLAQQSFIHRDLKPSNILLGNDMRAKVADFGLVKNAPDGNYSLETRLAGTFGYLAPEYAATGRVTTKVEVYAFGVVLMELITGKKALDDSVPDERSHLVTWFRRVLINKENVPKTIDQTLNPDEETMLSIYKMAELAGHCTAREPYQRPDMGHPVNVLVPLVEQWKPSIDTDESGYGVELNLPRALQRWQDNEGTSTSMFNDLSIFNQDIYFSYSH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03789 257 SMART serkin_6 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03789 257 SUPERFAMILY Protein kinase-like (PK-like) 1 212 IPR011009 -
Vivi4g03789 257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Vivi4g03789 257 FunFam receptor protein kinase TMK1 1 218 - -
Vivi4g03789 257 Gene3D Transferase(Phosphotransferase) domain 1 1 217 - -
Vivi4g03789 257 Pfam Protein kinase domain 21 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03789 257 PANTHER OSJNBA0070M12.3 PROTEIN 1 239 - -
Vivi4g03789 257 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03789 Vivi-Chr4 156904848 156907149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03789 19 199 Receptor kinase-like Gene Family AT4G02010 49.189 3.88e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Vivi4g03789 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03789 K00924 - vvo:131595659 529.25