Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03778 ATGAAGAACTCTGCTTCAGAACAAGTATTTTTCATCGAGAGCGATGAAGAAGGTGAAGAAAGGGAGTTGGGAAGAGATGAAATGGATGGAAATGAATCCGATTATTCCAATGACTCAAATGAAGTACAGAGAAAGCCGAGTTCTTACAGCATGGCTTGGCCTCAAAGTTACAGGCAATCCATTGATCTGTATGGTAGTGTGCCGTCGCCGAATATTGGATTTCTCGGCACTTCGTCGCTCACAGGATTAGGCAGTTCATTTCTTGGTTCATCCTTGACAAGGAGGCACACTGCTGAAATTATACCTCCACTGAAGAAGCCCCTGATACAACCAATAGATGAACAGCAGCGAAAGAGCTCTAAAACATTGATTCATCCTCACCCATCTAGGAAGTCTTCATGGAGGAAGGATCCTTCAAAGATTTCTCATGAAGTTCAAATTCCTAGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGTGTTGGAATCCTTTCGGCCCCTTATGCTCTTCAACAAGGTGGATGGAGTGCACTTGCAATCTTGCTGGTATTTTCAGTATTCTCCTTCTATACTGGCATGCTGTTGCGCTATTGCTTGGATAGTGAACCTGGACTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACCACTGGACGTGTTATAATTTCGATAATATTATACATGGAATTATATGCATGTTGCATTGAATACATAATTCTAGAAAGCGACAACTTATCTTCGTTATTTCCAAATGCACACTTGAGTTTGGGTGGAATTGAATTGAATGCACACATTCTATTTGCCCTGTTGACCACATTGGCTATTCTTCCCACCGTTTGGCTCCGGGACCTTCGCATTCTAAGTTACATATCAGCTTGTGGAGTTGTTGCAACGATTGCCGTGGTTCTGTCCTTGCTGTGGGTTGGCGTGGTAGACGATCTTCCTATGCATACTAAAGGAACAACAACAATTAATATTTCAACATTCCCTGTTGCTATTGGCCTCTATGGTTACTGCTTCGCTGGACATGCTGTCTTCCCCAACATATATACAGCTATGGCAAACCGAAATCAATTCCCTGCAGTGCTCTTGACATGTTTTGCTATTTGTACAACAATGTATTTCACAGTAGCTATTATGGGATACTCACTGTTTGGAGAAAATACACTGTCTCAGTATACTCTTAACATGCCCCGAGAATTAGTTGCCTCCAAAATTGCTCTGTGGACTACGGTGGTTAATCCATTTACCAAATATGCTTTGAGCCTAACTCCAGTAGCAATGTCTGTGGAGGAATTGATACCACCAAATAATCCCCACTTTCAGTTATACTCTATGCTCATCAGAACAGCGCTAGTGATTTCTACACTGCTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTGATGTCATTGATTGGGTCTATGCTCACAATGTTTGTTTCTCTTATTCTACCATCTGCTTGCTTCCTAAGCATCAGGCGTAACAGAATCACGCGCTCTCAGGCAGCACTTTGTATTGCAGTGATTGTAGTAGGCCTTGTAGCATCTGGTTTTGGATCATACTCAGCAATCTCCGAAATTATTAAAGAATTGTTTGCATGA 1629 0.4223 MKNSASEQVFFIESDEEGEERELGRDEMDGNESDYSNDSNEVQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTSSLTGLGSSFLGSSLTRRHTAEIIPPLKKPLIQPIDEQQRKSSKTLIHPHPSRKSSWRKDPSKISHEVQIPSQCSFGQAVLNGINALCGVGILSAPYALQQGGWSALAILLVFSVFSFYTGMLLRYCLDSEPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIILESDNLSSLFPNAHLSLGGIELNAHILFALLTTLAILPTVWLRDLRILSYISACGVVATIAVVLSLLWVGVVDDLPMHTKGTTTINISTFPVAIGLYGYCFAGHAVFPNIYTAMANRNQFPAVLLTCFAICTTMYFTVAIMGYSLFGENTLSQYTLNMPRELVASKIALWTTVVNPFTKYALSLTPVAMSVEELIPPNNPHFQLYSMLIRTALVISTLLVGLSVPFFGLVMSLIGSMLTMFVSLILPSACFLSIRRNRITRSQAALCIAVIVVGLVASGFGSYSAISEIIKELFA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03778 542 MobiDBLite consensus disorder prediction 35 50 - -
Vivi4g03778 542 MobiDBLite consensus disorder prediction 1 50 - -
Vivi4g03778 542 MobiDBLite consensus disorder prediction 116 138 - -
Vivi4g03778 542 Pfam Transmembrane amino acid transporter protein 151 533 IPR013057 -
Vivi4g03778 542 PANTHER OS05G0424000 PROTEIN-RELATED 159 524 - -
Vivi4g03778 542 FunFam Amino acid transporter AVT1A 149 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03778 Vivi-Chr4 156665244 156668934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03778 1 475 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.711 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03778 K15015 - gmx:100798108 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03778 4 156665244 156668934 Vivi4g03778 4 156665244 156668934 ECH