Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03767 ATGGGTTCGGTGGAGAAGTACCACGTGATCGAGCTCGTCGGCGAGGGCTCATTCGGCAAAGTCTACAAAGGAAGACTCAAGCACACTGGACAGACTGTTGCCATGAAGTTCATAATGAAGCACGGTAAAACTGAAAAGGATATTCACAATTTGAGGCAAGAAATTGAGATATTAAGGAAGTTGAAGCATGAAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTTGCACAAGGCGAGCTATTTGAGATAATTGAGGATGACAAATGCCTTCCGGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAACCGGATCATCCATCGTGATATGAAGCCCCAAAATATCCTCATCGGTTCTGGATCTATTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCGATGTCCACAAACACAGTTGTTTTGCGATCTATAAAAGGCACTCCATTATACATGGCTCCAGAACTTGTCCGAGAACAACCTTACAACCACACAGTAGATTTATGGTCTCTTGGTGTTATATTGTACGAGTTATTTGTAGGCCAACCACCATTTTACACAAATTATGTTTATACTCTCGTCAGACGCATTGTTAACGATCCGGTTAAATATCCTGATAGCATGACTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCCGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCTTTTGTTAAAGCAACTGACAACAAAATTGTGGCCATGGAACGGCATGAGATAAGTGGTTTGCCAAAGGACAGCGATACAACACAGGGGGTTGAAAGAAAAACCGTTCAAACTTCAACAGAAAAAAACAATCACACAACAGGTTTGGCGGAGCATATTGCTTCACCACTTCAGAATGAAACTCAGTTAAATGGTCCTAACATGAACGAAACCAATTCTAAAGTGCTTGACGAGTCTCCTAGATTTTCAAACCAAAATGATGCAGCAGAGTCAGGCTGCCAAAGACTAGACAGACTTGAAAGTAACTCTCGCACTGTCGAAGGTGCAAAAGTAATTGGTCAAGACAATGAAGCATTGGGATTTGTTCTGCAACCCCTGAAAAGATGGTCGAAGGGATCTCAAAATATTTGCAGTGATCAAGATCTTCCTGCTTCAAACCAGTCATTAAGAATTTTCTCAAATTTAGTTGATGCCGGTGTTTTCAGTTCTACTGAACAAATAGATGAACTCATAAGTGAGCTTCTTTTGTTTACCAGATCTGTTGTATCATTGAAATCTGCTGAAGTTTTTGAGCTGTTAGCAAAGGGTTTCTCTATCACCAAAATTTTGTTAGATATTGGTGGGAAATTCTTTTCAAAATCATATTCAAATCACTGGGTTGAATTGGTTGAAATCTATTCTCAGGTTGTAACTTTGGCAAATGATGCATCTGGAAGAGTTCTGTATGAGTCTAGTGCATGCATTACAATCATGTTGTCTAAAGTTGCTCAGGTGCTTAGATCATCTCAAATTTCAAGCTCAGAGACACTGAATGAAACAGCTAACAGAATTATAGAGCATGCAAAAACATCTGGCTTAATTGACCATTTGTGCTCATGCTTAGCAACTTCAGGTTCGGGTCTTATTGCAGGTTCTTCCAATATGCTACGGGCTGCTTCTGAAGCATGCAGGGCTGCATGGTCTTTGATTAATGCTCTGGATGTCCTTTTTATGAGAAAAAGTGCCATTTTGTTTCCCATCATTGCATTGCAGCGTCATTTTTCTCAGAGGACAGAAATTATGGATCACAGACAAGATCCCTTGTTTGATGAAGAATCAACAAAAATGGTTGATATAATGGCAAGAGCATTCCTGAGATCCAAAGCTGTTCAGGTTGCTGTGTACTACTGTTTTCACCAACGGATTGAGTCTGCAACAATTTGTTGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCATAATGGAGTTGTTCCATCTGTCCTTTGTGGTTTGCCCAGTTCCCTTCCTGTGACTACTGTTGTAAGTGGTGGTGGTGACAGAACTATTGTTTCAGAGATTTTCTCAGTTTTGTCAATATGCAGTTCCGCTCTCAATAAAGATGCACTCCCTGTAGAACCAAGTAACACTAAATGCAAATTAGCAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTCATTCTCACAATAATTGCACAATATTTGAAGTCAGCTGGAAGAAATTCTGCAACTTTTATGCTCACCACCTCACCAAAGAAGCAGCTGGCTCGACTCTCAATCCTTGCTCATCACGTTTCTTATGATGATAAAACAAAAGCCTCTTTCCAACATCAAAGTGCATCAGCTATGTTGGCTTTGGCGTCCATTCTTTCCCTCGAATCTGGAACTTCGACTGAGTCTCCGATATCTGAAATTGCTATGCCTTTAATTCCCCGAACTTCTACCCTAAGTGACCATCTTAAGTTTTCATCAGGTAATGAAAATGAACTGGACCATGGAAATTTTAATGGGAAGCTCCCATATTGGCTAGGGGTAAAAGATGGATGTGTTGGTCTTTTAGATTCCAAACTCAAGTTGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGTATACCTCTTCTTTTAATCGGCTTATTAAGCAATGGGTTTTTAAATGCTTCTCAAGAAAACGAGTGCCAAAACGATAAAGTTGGATTGTCTCCTATTGGTGTTGTGTGCACAGTTTCATCATTATGTCATTGTCTCTCTGGCGGCGCTTTGATTTTTCGTCAGATTTTAATTAGGAATGAACATGTTAAGCTCATATCCAACTTAATATGCGATGTTCATCTTGAGTTGATAAAATTCTGGACTGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCAGTCATAGATCTCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACATGGCTTGCAGTCAGCCACTGCTTCTGTTAGCAGTGGGTTTCTTCTTTATGTTGGTTCCCCTGGTCAGAGAGTATGCGTGGAAGACAATGATACAGTTAAGGCAATAGAAGAAGACATGGGTAAATACATTAAGATCCTTATGGAGGTTGGTGTGCCTAGTATTATCCTTCGATGCCTAGATTATATGGAGTTGAATGATTTGGGCAGGCCTGTGGCCTTTCTTGCTAAAATGGTATGCCAACGACCTTTAGCAGTCCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGGATGAAAAAGTTGTTCGACCTTTCGGCACCAAAAGAGGTTATGCTGGATGCTCTTATGATCATTTCTGATCTTGCTCGTATGGACAAGGGATTCTATGAATACATTAAAGGTGCTTTTGTTTTGGAGTTCTTGAAAAGTTTTCTTTCACACGAAGATCCGAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGCCGTCACAGTGCCTTTTTTTACAGTTCTCTTGCAAGATATCAAATCGTTAGTATCCTTATTGACCGATGCTCTGATCCGGACAAACGAACAAGGAAATTTGCTTGTTTTGCTAGCTGA 3597 0.4048 MGSVEKYHVIELVGEGSFGKVYKGRLKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEIIEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNYVYTLVRRIVNDPVKYPDSMTPNFKSFLKGLLNKAPESRLTWPALLEHPFVKATDNKIVAMERHEISGLPKDSDTTQGVERKTVQTSTEKNNHTTGLAEHIASPLQNETQLNGPNMNETNSKVLDESPRFSNQNDAAESGCQRLDRLESNSRTVEGAKVIGQDNEALGFVLQPLKRWSKGSQNICSDQDLPASNQSLRIFSNLVDAGVFSSTEQIDELISELLLFTRSVVSLKSAEVFELLAKGFSITKILLDIGGKFFSKSYSNHWVELVEIYSQVVTLANDASGRVLYESSACITIMLSKVAQVLRSSQISSSETLNETANRIIEHAKTSGLIDHLCSCLATSGSGLIAGSSNMLRAASEACRAAWSLINALDVLFMRKSAILFPIIALQRHFSQRTEIMDHRQDPLFDEESTKMVDIMARAFLRSKAVQVAVYYCFHQRIESATICCLQLLSRCCLHNGVVPSVLCGLPSSLPVTTVVSGGGDRTIVSEIFSVLSICSSALNKDALPVEPSNTKCKLANPSALVRHSCLILTIIAQYLKSAGRNSATFMLTTSPKKQLARLSILAHHVSYDDKTKASFQHQSASAMLALASILSLESGTSTESPISEIAMPLIPRTSTLSDHLKFSSGNENELDHGNFNGKLPYWLGVKDGCVGLLDSKLKLGGPLAVQQLCASGIPLLLIGLLSNGFLNASQENECQNDKVGLSPIGVVCTVSSLCHCLSGGALIFRQILIRNEHVKLISNLICDVHLELIKFWTGPGGGRAGVRDLINAVIDLLAFPFVALQNAHGLQSATASVSSGFLLYVGSPGQRVCVEDNDTVKAIEEDMGKYIKILMEVGVPSIILRCLDYMELNDLGRPVAFLAKMVCQRPLAVQLVSKGLLDPNRMKKLFDLSAPKEVMLDALMIISDLARMDKGFYEYIKGAFVLEFLKSFLSHEDPNMRAKACSALGNMCRHSAFFYSSLARYQIVSILIDRCSDPDKRTRKFACFAS 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03767 1198 SUPERFAMILY ARM repeat 371 1196 IPR016024 -
Vivi4g03767 1198 FunFam Aurora kinase A 2 89 - -
Vivi4g03767 1198 Coils Coil 41 61 - -
Vivi4g03767 1198 SUPERFAMILY ARM repeat 1034 1197 IPR016024 -
Vivi4g03767 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi4g03767 1198 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03767 1198 SUPERFAMILY Protein kinase-like (PK-like) 5 294 IPR011009 -
Vivi4g03767 1198 Coils Coil 1197 1198 - -
Vivi4g03767 1198 FunFam Serine/threonine-protein kinase 36 4 323 - -
Vivi4g03767 1198 Gene3D - 1025 1198 IPR011989 -
Vivi4g03767 1198 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Vivi4g03767 1198 CDD STKc_STK36 5 257 - -
Vivi4g03767 1198 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03767 1198 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Vivi4g03767 1198 PANTHER PROTEIN KINASE RELATED 4 1197 - -
Vivi4g03767 1198 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03767 Vivi-Chr4 156569901 156586757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03767 4 246 AGC Kinase Gene Family AT3G08720 37.143 2.71e-43 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Vivi4g03767 Pkinase 4.1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03767 K06228 - gmx:100792102 1865.12