Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03766 ATGGGTTCGGTGGAGAAGTACCACGTGATCGAGCTCGTCGGCGAGGGCTCATTCGGCAAAGTCTACAAAGGAAGACTCAAGCACACTGGACAGACTGTTGCCATGAAGTTCATAATGAAGCACGGTAAAACTGAAAAGGATATTCACAATTTGAGGCAAGAAATTGAGATATTAAGGAAGTTGAAGCATGAAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTTGCACAAGGCGAGCTATTTGAGATAATTGAGGATGACAAATGCCTTCCGGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAACCGGATCATCCATCGTGATATGAAGCCCCAAAATATCCTCATCGGTTCTGGATCTATTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCGATGTCCACAAACACAGTTGTTTTGCGATCTATAAAAGGCACTCCATTATACATGGCTCCAGAACTTGTCCGAGAACAACCTTACAACCACACAGTAGATTTATGGTCTCTTGGTGTTATATTGTACGAGTTATTTGTAGGCCAACCACCATTTTACACAAATTATGTTTATACTCTCGTCAGACGCATTGTTAACGATCCGGTTAAATATCCTGATAGCATGACTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCCGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCTTTTGTTAAAGCAACTGACAACAAAATTGTGGCCATGGAACGGCATGAGATAAGTGGTTTGCCAAAGGACAGCGATACAACACAGGGGGTTGAAAGAAAAACCGTTCAAACTTCAACAGAAAAAAACAATCACACAACAGGTTTGGCGGAGCATATTGCTTCACCACTTCAGAATGAAACTCAGTTAAATGGTCCTAACATGAACGAAACCAATTCTAAAGTGCTTGACGAGTCTCCTAGATTTTCAAACCAAAATGATGCAGCAGAGTCAGGCTGCCAAAGACTAGACAGACTTGAAAGTAACTCTCGCACTGTCGAAGGTGCAAAAGTAATTGGTCAAGACAATGAAGCATTGGGATTTGTTCTGCAACCCCTGAAAAGATGGTCGAAGGGATCTCAAAATATTTGCAGTGATCAAGATCTTCCTGCTTCAAACCAGTCATTAAGAATTTTCTCAAATTTAGTTGATGCCGGTGTTTTCAGTTCTACTGAACAAATAGATGAACTCATAAGTGAGCTTCTTTTGTTTACCAGATCTGTTGTATCATTGAAATCTGCTGAAGTTTTTGAGCTGTTAGCAAAGGGTTTCTCTATCACCAAAATTTTGTTAGATATTGGTGGGAAATTCTTTTCAAAATCATATTCAAATCACTGGGTTGAATTGGTTGAAATCTATTCTCAGGTTGTAACTTTGGCAAATGATGCATCTGGAAGAGTTCTGTATGAGTCTAGTGCATGCATTACAATCATGTTGTCTAAAGTTGCTCAGGTGCTTAGATCATCTCAAATTTCAAGCTCAGAGACACTGAATGAAACAGCTAACAGAATTATAGAGCATGCAAAAACATCTGGCTTAATTGACCATTTGTGCTCATGCTTAGCAACTTCAGGTTCGGGTCTTATTGCAGGTTCTTCCAATATGCTACGGGCTGCTTCTGAAGCATGCAGGGCTGCATGGTCTTTGATTAATGCTCTGGATGTCCTTTTTATGAGAAAAAGTGCCATTTTGTTTCCCATCATTGCATTGCAGCGTCATTTTTCTCAGAGGACAGAAATTATGGATCACAGACAAGATCCCTTGTTTGATGAAGAATCAACAAAAATGGTTGATATAATGGCAAGAGCATTCCTGAGATCCAAAGCTGTTCAGGTTGCTGTGTACTACTGTTTTCACCAACGGATTGAGTCTGCAACAATTTGTTGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCATAATGGAGTTGTTCCATCTGTCCTTTGTGGTTTGCCCAGTTCCCTTCCTGTGACTACTGTTGTAAGTGGTGGTGGTGACAGAACTATTGTTTCAGAGATTTTCTCAGTTTTGTCAATATGCAGTTCCGCTCTCAATAAAGATGCACTCCCTGTAGAACCAAGTAACACTAAATGCAAATTAGCAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTCATTCTCACAATAATTGCACAATATTTGAAGTCAGCTGGAAGAAATTCTGCAACTTTTATGCTCACCACCTCACCAAAGAAGCAGCTGGCTCGACTCTCAATCCTTGCTCATCACGTTTCTTATGATGATAAAACAAAAGCCTCTTTCCAACATCAAAGTGCATCAGCTATGTTGGCTTTGGCGTCCATTCTTTCCCTCGAATCTGGAACTTCGACTGAGTCTCCGATATCTGAAATTGCTATGCCTTTAATTCCCCGAACTTCTACCCTAAGTGACCATCTTAAGTTTTCATCAGGTAATGAAAATGAACTGGACCATGGAAATTTTAATGGGAAGCTCCCATATTGGCTAGGGGTAAAAGATGGATGTGTTGGTCTTTTAGATTCCAAACTCAAGTTGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGTATACCTCTTCTTTTAATCGGCTTATTAAGCAATGGGTTTTTAAATGCTTCTCAAGAAAACGAGTGCCAAAACGATAAAGTTGGATTGTCTCCTATTGGTGTTGTGTGCACAGTTTCATCATTATGTCATTGTCTCTCTGGCGGCGCTTTGATTTTTCGTCAGATTTTAATTAGGAATGAACATGTTAAGCTCATATCCAACTTAATATGCGATGTTCATCTTGAGTTGATAAAATTCTGGACTGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCAGTCATAGATCTCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACATGGCTTGCAGTCAGCCACTGCTTCTGTTAGCAGTGGGTTTCTTCTTTATGTTGGTTCCCCTGGTCAGAGAGTATGCGTGGAAGACAATGATACAGTTAAGGCAATAGAAGAAGACATGGGTAAATACATTAAGATCCTTATGGAGGTTGGTGTGCCTAGTATTATCCTTCGATGCCTAGATTATATGGAGTTGAATGATTTGGGCAGGCCTGTGGCCTTTCTTGCTAAAATGGTATGCCAACGACCTTTAGCAGTCCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGGATGAAAAAGTTGTTCGACCTTTCGGCACCAAAAGAGGTTATGCTGGATGCTCTTATGATCATTTCTGATCTTGCTCGTATGGACAAGGGATTCTATGAATACATTAAAGGTGCTTTTGTTTTGGAGTTCTTGAAAAGTTTTCTTTCACACGAAGATCCGAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGCCGTCACAGTGCCTTTTTTTACAGTTCTCTTGCAAGATATCAAATCGTTAGTATCCTTATTGACCGATGCTCTGATCCGGACAAACGAACAAGGAAATTTGCTTGTTTTGCTATTGGAAATGCAGCTTACCACAGTGATGTGTTGTATGAAGAGCTGAGGAGGTCGATTCCTCATCTGGCAAATTTGTTGCAAAAAGCAGAGGAGGACAAGACCAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAGACTTTGTGAAGACATTGTGTCTAAAGGAGCGGTTCAGTCTCTCCTGAAATTAATTTCCGATTATGCGGTATCAGCACTAAATCCAAGCAGAAATGATTCAACAAACGAGTCTCCTCTAAAGATTGCTCTCTTTTCCCTTGCAAAGATGTGTGCTCATCCACTCTGCAGGAAGTTCATCAGTTCATCCCCTTTGTTCCCTGTAATTGGAAGGCTTCTACAGTCTCCAGAATCATCCATTGCCAAATATGCATCAGTGATCATTAACAAAGTTGCTGAACCTTGA 4026 0.4076 MGSVEKYHVIELVGEGSFGKVYKGRLKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEIIEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNYVYTLVRRIVNDPVKYPDSMTPNFKSFLKGLLNKAPESRLTWPALLEHPFVKATDNKIVAMERHEISGLPKDSDTTQGVERKTVQTSTEKNNHTTGLAEHIASPLQNETQLNGPNMNETNSKVLDESPRFSNQNDAAESGCQRLDRLESNSRTVEGAKVIGQDNEALGFVLQPLKRWSKGSQNICSDQDLPASNQSLRIFSNLVDAGVFSSTEQIDELISELLLFTRSVVSLKSAEVFELLAKGFSITKILLDIGGKFFSKSYSNHWVELVEIYSQVVTLANDASGRVLYESSACITIMLSKVAQVLRSSQISSSETLNETANRIIEHAKTSGLIDHLCSCLATSGSGLIAGSSNMLRAASEACRAAWSLINALDVLFMRKSAILFPIIALQRHFSQRTEIMDHRQDPLFDEESTKMVDIMARAFLRSKAVQVAVYYCFHQRIESATICCLQLLSRCCLHNGVVPSVLCGLPSSLPVTTVVSGGGDRTIVSEIFSVLSICSSALNKDALPVEPSNTKCKLANPSALVRHSCLILTIIAQYLKSAGRNSATFMLTTSPKKQLARLSILAHHVSYDDKTKASFQHQSASAMLALASILSLESGTSTESPISEIAMPLIPRTSTLSDHLKFSSGNENELDHGNFNGKLPYWLGVKDGCVGLLDSKLKLGGPLAVQQLCASGIPLLLIGLLSNGFLNASQENECQNDKVGLSPIGVVCTVSSLCHCLSGGALIFRQILIRNEHVKLISNLICDVHLELIKFWTGPGGGRAGVRDLINAVIDLLAFPFVALQNAHGLQSATASVSSGFLLYVGSPGQRVCVEDNDTVKAIEEDMGKYIKILMEVGVPSIILRCLDYMELNDLGRPVAFLAKMVCQRPLAVQLVSKGLLDPNRMKKLFDLSAPKEVMLDALMIISDLARMDKGFYEYIKGAFVLEFLKSFLSHEDPNMRAKACSALGNMCRHSAFFYSSLARYQIVSILIDRCSDPDKRTRKFACFAIGNAAYHSDVLYEELRRSIPHLANLLQKAEEDKTKANAAGALSNLVRNSDRLCEDIVSKGAVQSLLKLISDYAVSALNPSRNDSTNESPLKIALFSLAKMCAHPLCRKFISSSPLFPVIGRLLQSPESSIAKYASVIINKVAEP 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03766 1341 FunFam Aurora kinase A 2 89 - -
Vivi4g03766 1341 Gene3D - 1067 1339 IPR011989 -
Vivi4g03766 1341 SUPERFAMILY Protein kinase-like (PK-like) 5 286 IPR011009 -
Vivi4g03766 1341 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Vivi4g03766 1341 Coils Coil 41 61 - -
Vivi4g03766 1341 PANTHER PROTEIN KINASE RELATED 4 1338 - -
Vivi4g03766 1341 SUPERFAMILY ARM repeat 1034 1338 IPR016024 -
Vivi4g03766 1341 SMART arm_5 1121 1161 IPR000225 GO:0005515
Vivi4g03766 1341 SMART arm_5 1245 1299 IPR000225 GO:0005515
Vivi4g03766 1341 SMART arm_5 1204 1244 IPR000225 GO:0005515
Vivi4g03766 1341 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03766 1341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi4g03766 1341 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1214 1247 IPR000225 GO:0005515
Vivi4g03766 1341 Coils Coil 1209 1229 - -
Vivi4g03766 1341 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Vivi4g03766 1341 CDD STKc_STK36 5 257 - -
Vivi4g03766 1341 FunFam Serine/threonine-protein kinase 36 4 323 - -
Vivi4g03766 1341 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03766 1341 Pfam HEAT repeats 1135 1239 - -
Vivi4g03766 1341 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03766 1341 FunFam Serine/threonine-protein kinase TIO 1068 1337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03766 Vivi-Chr4 156569901 156588517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03766 4 246 AGC Kinase Gene Family AT3G08720 37.143 2.01e-43 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Vivi4g03766 Pkinase 4.9e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03766 K06228 - gmx:100792102 2113.19