Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03765 ATGGGTTCGGTGGAGAAGTACCACGTGATTGAGCTAGTCGGCGAGGGCTCATTCGGCAAAGTCTACAAAGGAAGACTCAAGCACACTGGACAGACTGTTGCCATGAAGTTCATAATGAAACACGGTAAAACTGAAAAGGATATTCACAATCTGAGGCAAGAAATCGAGATATTAAGGAAGTTGAAGCATGAAAATATTATTCAAATGCTTGATTCTTTTGAAAGCCCACAAGAGTTTTGTGTTGTCACAGAATTCGCTCAAGGTGAGCTTTTTGAGATTCTCGAAGATGACAAATGCCTTCCCGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTGCATTATTTGCACTCCAACCGGATCATCCATCGTGATATGAAGCCCCAAAATATCCTCATTGGTTCTGGATCTATTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCGATGTCTACAAACACAGTTGTTTTGCGATCTATAAAAGGCACTCCATTATACATGGCTCCAGAACTTGTCCGGGAACAACCTTACAACCACACAGTAGATTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTTGTAGGCCAACCTCCATTTTACACAAATTCTGTTTATGCTCTCATCAGACACATTGTTAAGGATCCGGTTAAATATCCCGATAGCATGACTCCAAACTTCAAAAGCTTTTTGAGGGGTTTACTTAACAAGGCACCGGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCATTTGTTAAAGAAACTAACGAAGAAATTGAGGAAAGGGAACTGCATGAGATAAGTGGTTCGCCAAAGGACAATGATACAACACAGAGGGTTGAAAGAAAAACCATTCAAACTTCAGCAGGAAAAAACAATCACAAAACAGGTTTGGCGGAGCATATTTCTTCACCCCTTCAGAATGAAGCTCAGTTAAATAGTCCTAACATGAACAAAACCAATTCTAAAGTGCTTGATGAGTCTTCTGGATTTTCAAATCAAAATGATGTAGCAGAGTCAGGCTGCCAAAGACTGGACAAACTTGAAAGTAACTCTCGCACTGTCAAAGGTGCTAAACTAATTGGTCAAGACAATGAAGCATTTGGATTCGTTCTGCAACCCCTGAAAAGATGGTCAATGGGATCTCAAAATATTTGCAGTGGTCAAGATCTTCCTGCTTCAAACCAGTCATTAAGAATTCTCTCAAATCTAGTTGATGCCGGTGTCTTCAGTTCTACTGGACAAATAGACGAACTCATAAGTGAGCTTCTTTTGTTTACCAGATCTGTTGTGGCAATGAAGTCTGCTGAATTTTTTGACCTGTTAACTAAGGGTTTCTCGATCGCCAAAATTTTGCTAGATATTGGTGGGAAATTCTGTTCAACCTCGTATTCAAATCACTGGATTGAATTGGTCGAAATCTATTCTCAGGTTGTAACTTCTATAAATGATGCATCTGGAAGAGTTCTGTATGAATCTAGTGCCTGCATTACAGTCATGTTGTCTAAGGTTGCTCAGGTGCTTAGATCATCTCAAATTTCAAGCTCAGAGACACCGACCAAAACAGCTAACAGAATTATAGAGCATGCGAAAACATCTGGTTTAATTGACCATTTGTGCTCGTGCTTAGCGACTTCAGGTTCAGGTCTTATTGCAGGCTCTTCCAATATGCTACGGGCTGCTTCTGAAGCATGCAGGGCTGCCTGGTCTTTGATTAATGCTCTGGATGTCCTTTTTGTGAGAAAAAGTGCCATTTTGTTTCCCATTAGTGCATTGCAGAGTCATTTTTCGCAGAGGACGGAAATTATGGAACACAAACAAGATCCCTTGTTTGATGAAGAATCAACAAAAATGGTTGATGTAATGACAAGAGCATTCCTGAGATCAAAAGCTGTTCAGGTTGCTGTGTACTATTGTTTTCACCAACGGATTGAGTCTGCAACGATTTGTTGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCATAGTGGAATTGTTCCATCCGCTCTTTGTGGTCTGCCCAGTTCCCTTCCTCTAACTACTGTTGTAAGTGGTGGTGGTGATGGAACTATTGTTTCAGAGATTTTCTCAGTTTTGTCAATATGCAGTTCCTCTCTCAACAAAGATGCACCCGGTGTAGAACCAAGTAACACTAAATGCAAATTTGCAAATCCTTCTGCTCTGATTCGTCATTCATGTACCATTCTCACAATAATTGCACAATGTTTGAAGTCAACTGGAAGAAATTCTGCAATTTTTATGCTCACCACCTCACCAAAGAAGCAGCTTGCCCGACTCTCAGTTCTTTCTCATCACGTTTCTTATGATGACAAAACAAAAGCCTCTTTCCAACTTCAAAGTGCATCAGCCATGTTGGCTCTGGCATCCATTCTTTCACTCGAATCTGGGACTTCGGTTGAGTCTTCGATATCTGAAGTTGCTATGCCCTTAATTCCCCGAACTTCTACACTAAGTGACCATCTTAAATCTTCATCAGGAAATGAAAATGAACTGGACCATGGAAATTTTAATGGGAAGCTCCCAAATTGGCTAGGGGTAAAAGATGGGTGTGTTGGTCTTTTAGATTCCAAACTCAAGTTGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGTATACCTCTTCTTCTTATTGGCTTATTAAGCAATGCGTTTTTAAATGCTTCTCAAAGAAACGAGTGCCTAAATGATAAAGTTGGATTGTCTCCTATCGGTGTTGTGTGCACAGTTTCATCATTATGTCATTGTCTCTCTGGTGGCGCTTTAATTTTTCGTCAGATTTTGATTAGGAATGAACATGTTAAGCTCATATCCAACTTAATATGTGATGTTCATCTTAAGTTGATAAAATGCTGGACCGGACCTGGTGGAGGGAGAGCAGGAGTTCGAGATCTAATAAATGCAGTCATAGATCTCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACCGGGATTGCCATCAGCCACTGCTTCTGTTAGCAGTGGGTTTCTTCTTAACGTTGGTTCCCCTGGTCAGAGAGTATGCATGGAAGACAAGGATACAGTTAAGGCAATAGAAGAAGACATGGGAAAATACATTAAGATCCTTATGGAGGTTGGTGTGCCTAGTCTTATCCTTCGATGCCTAGACCATATGGAATTGAATGATATCGGTAGGCCTGTGGCCTTTCTTGCTAAAATGGTGTGCCAGCGACCTTTAGCTGTCCAACTTGTGAGTAAAGGTCTTTTGGATCCTAATAGGATGAAAAGGTTGTTTGACCTTTCGGGACCAAAAGAGATTATGCTGGATGCTCTTATGATCATTTCTGATCTTTCTCGTATGGACAAGGGATTCTATGAATACATTAAAGGTGCTTCTGTTTTGGAGTTCTTAAAAAGTTTTCTTTCACATGAGGATCCAAATGTGCGTGCGAAAGCTTGCAGTGCTCTTGGAAACATGTGCCGTCACAGTGCCTTTTTTTACAGTTCTCTTGCAAGATATCAAATCGTTAGTATCCTTATTGACCGATGCTCTGATCCAGACAAACGGACAAGGAAGTTTGCTTGTTTTGCTAGCTGA 3597 0.4087 MGSVEKYHVIELVGEGSFGKVYKGRLKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDSMTPNFKSFLRGLLNKAPESRLTWPALLEHPFVKETNEEIEERELHEISGSPKDNDTTQRVERKTIQTSAGKNNHKTGLAEHISSPLQNEAQLNSPNMNKTNSKVLDESSGFSNQNDVAESGCQRLDKLESNSRTVKGAKLIGQDNEAFGFVLQPLKRWSMGSQNICSGQDLPASNQSLRILSNLVDAGVFSSTGQIDELISELLLFTRSVVAMKSAEFFDLLTKGFSIAKILLDIGGKFCSTSYSNHWIELVEIYSQVVTSINDASGRVLYESSACITVMLSKVAQVLRSSQISSSETPTKTANRIIEHAKTSGLIDHLCSCLATSGSGLIAGSSNMLRAASEACRAAWSLINALDVLFVRKSAILFPISALQSHFSQRTEIMEHKQDPLFDEESTKMVDVMTRAFLRSKAVQVAVYYCFHQRIESATICCLQLLSRCCLHSGIVPSALCGLPSSLPLTTVVSGGGDGTIVSEIFSVLSICSSSLNKDAPGVEPSNTKCKFANPSALIRHSCTILTIIAQCLKSTGRNSAIFMLTTSPKKQLARLSVLSHHVSYDDKTKASFQLQSASAMLALASILSLESGTSVESSISEVAMPLIPRTSTLSDHLKSSSGNENELDHGNFNGKLPNWLGVKDGCVGLLDSKLKLGGPLAVQQLCASGIPLLLIGLLSNAFLNASQRNECLNDKVGLSPIGVVCTVSSLCHCLSGGALIFRQILIRNEHVKLISNLICDVHLKLIKCWTGPGGGRAGVRDLINAVIDLLAFPFVALQNAPGLPSATASVSSGFLLNVGSPGQRVCMEDKDTVKAIEEDMGKYIKILMEVGVPSLILRCLDHMELNDIGRPVAFLAKMVCQRPLAVQLVSKGLLDPNRMKRLFDLSGPKEIMLDALMIISDLSRMDKGFYEYIKGASVLEFLKSFLSHEDPNVRAKACSALGNMCRHSAFFYSSLARYQIVSILIDRCSDPDKRTRKFACFAS 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03765 1198 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Vivi4g03765 1198 FunFam Aurora kinase A 2 89 - -
Vivi4g03765 1198 Pfam HEAT repeat 1134 1162 IPR000357 GO:0005515
Vivi4g03765 1198 MobiDBLite consensus disorder prediction 266 301 - -
Vivi4g03765 1198 Coils Coil 41 61 - -
Vivi4g03765 1198 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03765 1198 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03765 1198 Gene3D Transferase(Phosphotransferase) domain 1 2 334 - -
Vivi4g03765 1198 MobiDBLite consensus disorder prediction 286 301 - -
Vivi4g03765 1198 SUPERFAMILY ARM repeat 509 1196 IPR016024 -
Vivi4g03765 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi4g03765 1198 PANTHER PROTEIN KINASE RELATED 4 1197 - -
Vivi4g03765 1198 MobiDBLite consensus disorder prediction 315 342 - -
Vivi4g03765 1198 Gene3D - 1026 1198 IPR011989 -
Vivi4g03765 1198 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Vivi4g03765 1198 CDD STKc_STK36 5 257 - -
Vivi4g03765 1198 MobiDBLite consensus disorder prediction 266 285 - -
Vivi4g03765 1198 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03765 1198 FunFam Serine/threonine-protein kinase 36 4 324 - -
Vivi4g03765 1198 SUPERFAMILY ARM repeat 1034 1197 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03765 Vivi-Chr4 156527967 156545352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03765 4 270 AGC Kinase Gene Family AT3G08720 36.727 1.71e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Vivi4g03765 Pkinase 2.9e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03765 K06228 - gmx:100792102 1883.61