Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03753 ATGGACGTTCTAGAACAACAAGAATCATTAAACCAACTTGATTTGGATTATATCCTCGATCATTTACCAGAATGTCCCGTCACCGATTTTTTTCCGGAGGAAATTAATCCTCCTCCGGTTTCCGTCCCCGACACTCCCTCGCCAAATCCGTCTCTATCGAAGATCGAGAACTTTCTCATGACAGATTTCGGCGACGAAGAAGGAACCGCGTCGCCGGACTCTGAATATGATAAGTTTTTAGACGAGATTCTCGTTGATGTTGATGTTGAGCCGCTTCCTCAATCGGAGGAAGCTTTGACTCCTTCCGATAAAGACAGAGTTGATCCAGTAACTCCCGAAGTGGTTCCTCATGAACCCGTTTCAAAGAAGCAAATAAGGCAGATGAGGAACAGGGATGCTGCTGTGAAATCAAGGGAGAGGAAGAAGATGTATGTGAAAAACCTCGAGATAAAGAGTAGGTATTTTGAAGGGGAATGCAGAAGACTGGAGCATTTGCTCCAGTGCTGTTATGCTGAGAACCACGCTTTGCGGCTGTGTTTGCAATCGCGTGGTGCGTTTGGTGCTTCCATGACCATGCAGGAGTCTGCCGTGCTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTATGGTTCCTGGGCATCATGTGCCAACTCAGCCTTCCCCTTTTACTGTGGCTAACAGTGCTACCTCCAAAAGAAAACATGGAACACAAAAGTCTAAGAAGGGTGGCTCTAAAAAGGCCAAATAGTAATATAAACTATTTCCTGACTCAGTCGTTTGTAAAGAGTAGAAGATGCCAAGCTTCAAGAACGAAGATGAAAGTTGATTTTATCGTGTTCTAA 843 0.4543 MDVLEQQESLNQLDLDYILDHLPECPVTDFFPEEINPPPVSVPDTPSPNPSLSKIENFLMTDFGDEEGTASPDSEYDKFLDEILVDVDVEPLPQSEEALTPSDKDRVDPVTPEVVPHEPVSKKQIRQMRNRDAAVKSRERKKMYVKNLEIKSRYFEGECRRLEHLLQCCYAENHALRLCLQSRGAFGASMTMQESAVLLLESLLLGSLLWFLGIMCQLSLPLLLWLTVLPPKENMEHKSLRRVALKRPNSNINYFLTQSFVKSRRCQASRTKMKVDFIVF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03753 280 Pfam bZIP transcription factor 121 164 IPR004827 GO:0003700|GO:0006355
Vivi4g03753 280 CDD bZIP_HY5-like 123 174 - -
Vivi4g03753 280 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 140 IPR004827 GO:0003700|GO:0006355
Vivi4g03753 280 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 4 244 - -
Vivi4g03753 280 Gene3D - 121 182 - -
Vivi4g03753 280 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Vivi4g03753 280 SUPERFAMILY Leucine zipper domain 122 178 IPR046347 GO:0003700|GO:0006355
Vivi4g03753 280 MobiDBLite consensus disorder prediction 94 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03753 Vivi-Chr4 156437951 156440050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03753 135 197 bZIP Transcription Factor Family AT1G42990 56.250 5.99e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g03753 bZIP_1 7.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03753 - - pvu:PHAVU_007G247600g 268.855