Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03752 ATGGACGTTCTAGAACAACAAGAATCATTAAACCAACTTGATTTGGATTATATCCTCGATCATTTACCAGAATGTCCCGTCACCGATTTTTTTCCGGAGGAAATTAATCCTCCTCCGGTTTCCGTCCCCGACACTCCCTCGCCAAATCCGTCTCTATCGAAGATCGAGAACTTTCTCATGACAGATTTCGGCGACGAAGAAGGAACCGCGTCGCCGGACTCTGAATATGATAAGTTTTTAGACGAGATTCTCGTTGATGTTGATGTTGAGCCGCTTCCTCAATCGGAGGAAGCTTTGACTCCTTCCGATAAAGACAGAGTTGATCCAGTAACTCCCGAAGTGGTTCCTCATGAACCCGTTTCAAAGAAGCAAATAAGGCAGATGAGGAACAGGGATGCTGCTGTGAAATCAAGGGAGAGGAAGAAGATGTATGTGAAAAACCTCGAGATAAAGAGTAGGTATTTTGAAGGGGAATGCAGAAGACTGGAGCATTTGCTCCAGTGCTGTTATGCTGAGAACCACGCTTTGCGGCTGTGTTTGCAATCGCGTGGTGCGTTTGGTGCTTCCATGACCATGCAGGAGTCTGCCGTGCTCTTAATCCCTGCTGCTGGGTTCCCTGCTATGGTTCCTGGGCATCATGTGCCAACTCAGCCTTCCCCTTTTACTGTGGCTAACAGTGCTACCTCCAAAAGAAAACATGGAACACAAAAGTCTAAGAAGGGTGGCTCTAAAAAGGCCAAATAG 744 0.4691 MDVLEQQESLNQLDLDYILDHLPECPVTDFFPEEINPPPVSVPDTPSPNPSLSKIENFLMTDFGDEEGTASPDSEYDKFLDEILVDVDVEPLPQSEEALTPSDKDRVDPVTPEVVPHEPVSKKQIRQMRNRDAAVKSRERKKMYVKNLEIKSRYFEGECRRLEHLLQCCYAENHALRLCLQSRGAFGASMTMQESAVLLIPAAGFPAMVPGHHVPTQPSPFTVANSATSKRKHGTQKSKKGGSKKAK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03752 247 MobiDBLite consensus disorder prediction 216 247 - -
Vivi4g03752 247 MobiDBLite consensus disorder prediction 94 118 - -
Vivi4g03752 247 MobiDBLite consensus disorder prediction 232 247 - -
Vivi4g03752 247 CDD bZIP_HY5-like 123 174 - -
Vivi4g03752 247 Gene3D - 121 182 - -
Vivi4g03752 247 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 4 215 - -
Vivi4g03752 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 140 IPR004827 GO:0003700|GO:0006355
Vivi4g03752 247 Pfam bZIP transcription factor 121 164 IPR004827 GO:0003700|GO:0006355
Vivi4g03752 247 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Vivi4g03752 247 SUPERFAMILY Leucine zipper domain 122 178 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03752 Vivi-Chr4 156437951 156440053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03752 135 197 bZIP Transcription Factor Family AT1G42990 56.250 1.80e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g03752 bZIP_1 5.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03752 - - pvu:PHAVU_007G247600g 196.823