Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03746 ATGGAAGTTGAAACGGGTGAAGAAGATATGGTGAGGGCAGTTAGTAATGGAAGGGTGAGGAAGAGTTTTGGAGAGTTGATCCAAAACTCGGCAAGCTTCCGTGAGAGAAGTGTCGAAGAGGAGCCGAAATGGGAGGCGTTGTGGAGGCTTCCGACATATGATAGAATGAGGAAAGTGATTTTGAAGCAAGTTCTTGAAAATGGAGAAGTGAAGTATGAAGAAGTTGATATCACCAAGCTTGGAGGAGAGGAAAAGAAGCATATTTTGGAGAGTATAATAAAGACTGCTGAAGTAGACAATGAGAATTTTCTACAAAAAATGAGAGACAGAATTGATAGGGTAGGAATTGAGATTCCTAAGATAGAAGTCCGGTTTGAGAATTTATCAGTTGAAGGGGATGCATATGATGGAACCAGGGCCTTGCCAACACTAATCAATGCTACCCTCAATATAATAGAGGGACTTTTGAGTTACATCAAGATTTTGGCATTTAAGAAAAGGGTTGTCAAGATTCTCAAAGATGTTAGTGGAATTGTAAAACCATCAAGAATGACATTATTACTAGGACCTCCAGGTTCAGGAAAAACTACACTGCTTCAGGCACTTGCTGGAAAAATGGACAAGGATCTAAGGGTATCAGGAAGGGTGACTTACAATGGTCATGAATTGTCAGAATTTGTTCCTCAAAGAACTTGTGCTTATATTAGTCAGTATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTCTCCGGACGCTGCTTAGGTGTTGGAACAAGGTATGATATGTTGACAGAATTGTCAAGACGAGAAAAAGCATCAGCTATCAAACCAGATCCTGAAATAGATGCTTTCATGAAAGCCACATCAATGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGGTTGGAAACTTGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCAGGTGGACAAAAGAAGCGTCTAACCACCGGTGAGATGTTGGTAGGACCTGCAAAAGCGCTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCTACAACCTTCCAAATTGTCAGGTTTATGAGGCAGATGGTTCATATCATGGATGTCGCTATGATAATCTCACTTCTTCAACCTGCACCAGAAACGTATAACCTTTTTGATGATATAGTATTACTTTCAGAAGGTGAGATTGTCTATCAAGGTCCCCGTGAGAATGTTCTCGATTTTTTTCAAAGTGTGGGCTTCAAATGCCCGGAAAGGAAAGGAATTGCAGACTTTTTACAAGAGGTAACTTCTAGGAAGGATCAAGAACAGTACTGGTTCAGAAGGGACATACCTTATCAATACGTTAGCGTGCCTGATTTTGTAACCCACTTCAACAATTACCGCATTGGTAAACAACTTCGTGAAGAGATTCAAGTTCCCTTTGATTCTAGTAAAACTCATCATGCTGCATTAGTGAAGGAAAAGTACGGAATCCCCAAATGGGAACTCTTCAAGGCATGTTTTTCAAGAGAATGGCTATTCATGAAGCGTAGCTATTTTGTTTATATATTTAAGACTTTTCAGATTACTATCATGTCTATAATTACCATGACAGTATTTTTTAGAACAAAAATGGAGCACGGTCAACTTGAGGATGGGGGAAAATTTTATGGTGCACTGTTTTTCAGCCTTATCAATGTCATGTTCAATGGAGCGGCAGAACTTGCAATGACTGTTAACAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCTTATTTTATCCAGCATGGGCTTTTGCATTGCCCATTTGGGTACTCAGAGTTCCTCTCTCTATAGTAGAATCTGTATTATGGATCGTCCTTACTTATTATACTATTGGTTTTGCTCCAGCACCTAGTAGGTTTTTCCGTCAACTACTAGCATTCTTCTGTGTGAATCAAATGGCTCTATCCCTTTTCCGGTTCATTGCTGCAATCGGAAGGACAAGAGTTGTGGCTAACACATTTGCTTCCATAACTATTTTAGCTGTTTTCGTCCTAAGTGGATTTACGGTTTCAAGAGATGATATTGGGCCATGGATGATATGGTGCTACTATGCTTCGCCTATGATGTATGGAATGACTGCAATAAGCATCAATGAATTTCTAGACAAAAGATGGAGTACTCCTAATTTGGACCCTAGAATCGATGAACCCACAGTTGGGAAGGCATTACTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATATCTATTGGTGCTCTTATAGGATTTTCTCTACTGTTCAATGTCTGTTTCATTCTCGCTCTAACTTACTTGGACCCATTCAGAAGCTCAAAATCTATCTTGGTGGAACAGGAAGACAATAGGGAAACCACGACGACATCCTCCTCAGTGGAAAAAACAACAGTAGAAATGACAGAAAGTTCAGTTTCAAATGTTGAATCATTTGATGGTGTTGACATGGAAGTAAGAAACAACACGCGTAGCTCTATTCCTAAAGCTGCAAAGAATGCAAAATTCAGGAAGGGAATGGTGTTACCCTTTCAGCCTCTGTCACTTGTTTTTGAAAATGTGAATTATCATATCGATATGCCAAATGAAATGAAGAAGCAAGGAATTGAAGCGAACAGACTCCAACTACTAAGAAACATAAGTGGTGCTTTTAGGCCTGGAATTTTAACAGCGTTAGTCGGTGTAAGTGGTGCTGGAAAAACAACTTTGATGGATGTTCTTGCAGGAAGGAAAACTAGTGGTCACATAGAAGGAAGTATCAGCATATCGGGTTATCACAAGAACCAAGCAACTTTTGCTCGGATTAGCGGTTATTGTGAACAAAATGATATTCACTCTCCTAATATTACAGTTTATGAATCGCTTCTGTTTTCTGCTTGGTTGCGGCTCAGTAAAGAGGTCGATATAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTAGTTGAGTTACATCTAGTGAGAAATTTCTTAGTCGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCGAATCCTTCCATCATCTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCTGTTGTTATGCGTACAATTAGAAACACAGTGGATACTGGGAGAACTGTTGTGTGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGCTGCTTTTGTTGAAGACGGGTGGACAAGTGATATATGGTGGTCCTCTAGGTCGAAATTCTGAGAAACTTATCGAGTACTTTGAGGCTATTACAGGAATTCCAAAGATTGAAGATGGATATAATCCAGCTACGTGGATGCTGGAGATCAGTTCTCCTGTGGTTGAGTCTCAGCTTGATATAGATTTTGCGGAATTATACAATAACTCAAGCCTTTACGAAAAGAGCCAAGAACTTATCAAGGAACTATCTACACCAGCACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCACAACCATTTCTTGCTCAATGCAATGCTTGCTTCTGGAAACAGTACTGCTCCTATTGGAGGAATCCGCAGTATAATGCCATCAGATTCTTCATCACAATAGTTATTGGTGTTTTGTTTGGACTTATTTATTGGAAAAAAGGAGATAAGATAGAAAAGGAACAAGACCTTTTAAATCTTGTTGGCGCTATGTATTCCTCGGTTATTTTCCTTGGTGCATCCAACACAAGCAGTGTGCAACCTATTATTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCAGCTGGATTGTACTCAGAACTGCCCTATGCAATTGGTCAGATTGCGATTGAAGTAATTTATGTTGCAATTCAAAGTCTGATATACTCCACTATCCTCTACTGGATGATTGGGTTCCAACCACAAGCCGAAAACTTCTTTTGGTTCTACTTCTTCATATTCATGTCCTTTATCTACTTCACGCTATATGGAATGATGACGGTGGCCCTGACACCAAACCACCAAATCGCTGCCATCGTGATGTCTTTTTTCATCAGTTTTTGGAACCTATTCTCTGGTTTTCTTATTCCAAGAACGCAAATTCCAATATGGTGGAGATGGTATTATTGGGCATCTCCAGTGGCATGGACTATATATGGACTAGTGACATCGCAGGTGGGCGATAAGGATAGTCCAATAGAGGTACCTGGATATAGTCTCATGACAGTAAAAGATTATCTTGAGAGGCGATTGGGGTTTGAACATGACTTCCTTGGATTTGTTGTTTTGGCTCATATTGCTTTTTGCCTTCTCTTCCTTTTTGTATTTGCCTATGGCATCAAGTTTTTAAACTTCCAGAAAAGATAA 4392 0.3973 MEVETGEEDMVRAVSNGRVRKSFGELIQNSASFRERSVEEEPKWEALWRLPTYDRMRKVILKQVLENGEVKYEEVDITKLGGEEKKHILESIIKTAEVDNENFLQKMRDRIDRVGIEIPKIEVRFENLSVEGDAYDGTRALPTLINATLNIIEGLLSYIKILAFKKRVVKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYNGHELSEFVPQRTCAYISQYDLHHGEMTVRETLDFSGRCLGVGTRYDMLTELSRREKASAIKPDPEIDAFMKATSMEGQETSLVTDYILKILGLETCADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVAMIISLLQPAPETYNLFDDIVLLSEGEIVYQGPRENVLDFFQSVGFKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYQYVSVPDFVTHFNNYRIGKQLREEIQVPFDSSKTHHAALVKEKYGIPKWELFKACFSREWLFMKRSYFVYIFKTFQITIMSIITMTVFFRTKMEHGQLEDGGKFYGALFFSLINVMFNGAAELAMTVNRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSIVESVLWIVLTYYTIGFAPAPSRFFRQLLAFFCVNQMALSLFRFIAAIGRTRVVANTFASITILAVFVLSGFTVSRDDIGPWMIWCYYASPMMYGMTAISINEFLDKRWSTPNLDPRIDEPTVGKALLKARGIFTEDYWYWISIGALIGFSLLFNVCFILALTYLDPFRSSKSILVEQEDNRETTTTSSSVEKTTVEMTESSVSNVESFDGVDMEVRNNTRSSIPKAAKNAKFRKGMVLPFQPLSLVFENVNYHIDMPNEMKKQGIEANRLQLLRNISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGHIEGSISISGYHKNQATFARISGYCEQNDIHSPNITVYESLLFSAWLRLSKEVDIETRKMFIEEVIELVELHLVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTIRNTVDTGRTVVCTIHQPSIDIFEHFDELLLLKTGGQVIYGGPLGRNSEKLIEYFEAITGIPKIEDGYNPATWMLEISSPVVESQLDIDFAELYNNSSLYEKSQELIKELSTPAPGTKDLYFPSKYSQPFLAQCNACFWKQYCSYWRNPQYNAIRFFITIVIGVLFGLIYWKKGDKIEKEQDLLNLVGAMYSSVIFLGASNTSSVQPIIAIERTVLYRERAAGLYSELPYAIGQIAIEVIYVAIQSLIYSTILYWMIGFQPQAENFFWFYFFIFMSFIYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKDSPIEVPGYSLMTVKDYLERRLGFEHDFLGFVVLAHIAFCLLFLFVFAYGIKFLNFQKR 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03746 1463 FunFam ABC transporter G family member 34 159 463 - -
Vivi4g03746 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 1098 IPR027417 -
Vivi4g03746 1463 Pfam ABC transporter 172 352 IPR003439 GO:0005524
Vivi4g03746 1463 Pfam ABC-2 type transporter 1188 1399 IPR013525 GO:0016020|GO:0140359
Vivi4g03746 1463 Pfam ABC-2 type transporter 508 720 IPR013525 GO:0016020|GO:0140359
Vivi4g03746 1463 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 21 1463 - -
Vivi4g03746 1463 Gene3D - 863 1111 IPR027417 -
Vivi4g03746 1463 Pfam Plant PDR ABC transporter associated 733 790 IPR013581 -
Vivi4g03746 1463 FunFam ABC transporter G family member 40 876 1106 - -
Vivi4g03746 1463 MobiDBLite consensus disorder prediction 794 813 - -
Vivi4g03746 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 156 429 IPR003439 GO:0005524
Vivi4g03746 1463 Pfam ABC-transporter N-terminal 96 147 IPR029481 -
Vivi4g03746 1463 SMART AAA_5 899 1091 IPR003593 GO:0016887
Vivi4g03746 1463 SMART AAA_5 181 406 IPR003593 GO:0016887
Vivi4g03746 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 209 IPR027417 -
Vivi4g03746 1463 CDD ABCG_PDR_domain1 170 411 IPR034001 -
Vivi4g03746 1463 MobiDBLite consensus disorder prediction 796 813 - -
Vivi4g03746 1463 CDD ABCG_PDR_domain2 859 1097 IPR034003 -
Vivi4g03746 1463 Pfam ABC transporter 890 1041 IPR003439 GO:0005524
Vivi4g03746 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 428 IPR027417 -
Vivi4g03746 1463 Gene3D - 161 456 IPR027417 -
Vivi4g03746 1463 Pfam ABC-2 type transporter 387 441 IPR043926 GO:0140359
Vivi4g03746 1463 Pfam ABC-2 type transporter 1071 1142 IPR043926 GO:0140359
Vivi4g03746 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 871 1114 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03746 Vivi-Chr4 156367641 156375540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03746 887 1074 Calmodulin-binding Proteins AT2G36910 26.108 4.89e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03746 K08711 - gmx:100788067 2393.62