Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03745 ATGGAAGTTGAAACGGGTGAAGAAGATATGGTGAGGGCAGTTAGTAATGGAAGGGTGAGGAAGAGTTTTGGAGAGTTGATCCAAAACTCGGCAAGCTTCCGTGAGAGAAGTGTCGAAGAGGAGCCGAAATGGGAGGCGTTGTGGAGGCTTCCGACATATGATAGAATGAGGAAAGTGATTTTGAAGCAAGTTCTTGAAAATGGAGAAGTGAAGTATGAAGAAGTTGATATCACCAAGCTTGGAGGAGAGGAAAAGAAGCATATTTTGGAGAGTATAATAAAGACTGCTGAAGTAGACAATGAGAATTTTCTACAAAAAATGAGAGACAGAATTGATAGGGTAGGAATTGAGATTCCTAAGATAGAAGTCCGGTTTGAGAATTTATCAGTTGAAGGGGATGCATATGATGGAACCAGGGCCTTGCCAACACTAATCAATGCTACCCTCAATATAATAGAGGGACTTTTGAGTTACATCAAGATTTTGGCATTTAAGAAAAGGGTTGTCAAGATTCTCAAAGATGTTAGTGGAATTGTAAAACCATCAAGAATGACATTATTACTAGGACCTCCAGGTTCAGGAAAAACTACACTGCTTCAGGCACTTGCTGGAAAAATGGACAAGGATCTAAGGGTATCAGGAAGGGTGACTTACAATGGTCATGAATTGTCAGAATTTGTTCCTCAAAGAACTTGTGCTTATATTAGTCAGTATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTCTCCGGACGCTGCTTAGGTGTTGGAACAAGGTATGATATGTTGACAGAATTGTCAAGACGAGAAAAAGCATCAGCTATCAAACCAGATCCTGAAATAGATGCTTTCATGAAAGCCACATCAATGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGGTTGGAAACTTGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCAGGTGGACAAAAGAAGCGTCTAACCACCGGTGAGATGTTGGTAGGACCTGCAAAAGCGCTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCTACAACCTTCCAAATTGTCAGGTTTATGAGGCAGATGGTTCATATCATGGATGTCGCTATGATAATCTCACTTCTTCAACCTGCACCAGAAACGTATAACCTTTTTGATGATATAGTATTACTTTCAGAAGGTGAGATTGTCTATCAAGGTCCCCGTGAGAATGTTCTCGATTTTTTTCAAAGTGTGGGCTTCAAATGCCCGGAAAGGAAAGGAATTGCAGACTTTTTACAAGAGGTAACTTCTAGGAAGGATCAAGAACAGTACTGGTTCAGAAGGGACATACCTTATCAATACGTTAGCGTGCCTGATTTTGTAACCCACTTCAACAATTACCGCATTGGTAAACAACTTCGTGAAGAGATTCAAGTTCCCTTTGATTCTAGTAAAACTCATCATGCTGCATTAGTGAAGGAAAAGTACGGAATCCCCAAATGGGAACTCTTCAAGGCATGTTTTTCAAGAGAATGGCTATTCATGAAGCGTAGCTATTTTGTTTATATATTTAAGACTTTTCAGATTACTATCATGTCTATAATTACCATGACAGTATTTTTTAGAACAAAAATGGAGCACGGTCAACTTGAGGATGGGGGAAAATTTTATGGTGCACTGTTTTTCAGCCTTATCAATGTCATGTTCAATGGAGCGGCAGAACTTGCAATGACTGTTAACAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCTTATTTTATCCAGCATGGGCTTTTGCATTGCCCATTTGGGTACTCAGAGTTCCTCTCTCTATAGTAGAATCTGTATTATGGATCGTCCTTACTTATTATACTATTGGTTTTGCTCCAGCACCTAGTAGGTTTTTCCGTCAACTACTAGCATTCTTCTGTGTGAATCAAATGGCTCTATCCCTTTTCCGGTTCATTGCTGCAATCGGAAGGACAAGAGTTGTGGCTAACACATTTGCTTCCATAACTATTTTAGCTGTTTTCGTCCTAAGTGGATTTACGGTTTCAAGAGATGATATTGGGCCATGGATGATATGGTGCTACTATGCTTCGCCTATGATGTATGGAATGACTGCAATAAGCATCAATGAATTTCTAGACAAAAGATGGAGTACTCCTAATTTGGACCCTAGAATCGATGAACCCACAGTTGGGAAGGCATTACTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATATCTATTGGTGCTCTTATAGGATTTTCTCTACTGTTCAATGTCTGTTTCATTCTCGCTCTAACTTACTTGGACCCATTCAGAAGCTCAAAATCTATCTTGGTGGAACAGGAAGACAATAGGGAAACCACGACGACATCCTCCTCAGTGGAAAAAACAACAGTAGAAATGACAGAAAGTTCAGTTTCAAATGTTGAATCATTTGATGTTACTACAGGTGTTGACATGGAAGTAAGAAACAACACGCGTAGCTCTATTCCTAAAGCTGCAAAGAATGCAAAATTCAGGAAGGGAATGGTGTTACCCTTTCAGCCTCTGTCACTTGTTTTTGAAAATGTGAATTATCATATCGATATGCCAAATGAAATGAAGAAGCAAGGAATTGAAGCGAACAGACTCCAACTACTAAGAAACATAAGTGGTGCTTTTAGGCCTGGAATTTTAACAGCGTTAGTCGGTGTAAGTGGTGCTGGAAAAACAACTTTGATGGATGTTCTTGCAGGAAGGAAAACTAGTGGTCACATAGAAGGAAGTATCAGCATATCGGGTTATCACAAGAACCAAGCAACTTTTGCTCGGATTAGCGGTTATTGTGAACAAAATGATATTCACTCTCCTAATATTACAGTTTATGAATCGCTTCTGTTTTCTGCTTGGTTGCGGCTCAGTAAAGAGGTCGATATAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTAGTTGAGTTACATCTAGTGAGAAATTTCTTAGTCGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCGAATCCTTCCATCATCTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCTGTTGTTATGCGTACAATTAGAAACACAGTGGATACTGGGAGAACTGTTGTGTGCACAATTCATCAACCAAGCATTGATATATTTGAACATTTTGATGAGCTGCTTTTGTTGAAGACGGGTGGACAAGTGATATATGGTGGTCCTCTAGGTCGAAATTCTGAGAAACTTATCGAGTACTTTGAGGCTATTACAGGAATTCCAAAGATTGAAGATGGATATAATCCAGCTACGTGGATGCTGGAGATCAGTTCTCCTGTGGTTGAGTCTCAGCTTGATATAGATTTTGCGGAATTATACAATAACTCAAGCCTTTACGAAAAGAGCCAAGAACTTATCAAGGAACTATCTACACCAGCACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCACAACCATTTCTTGCTCAATGCAATGCTTGCTTCTGGAAACAGTACTGCTCCTATTGGAGGAATCCGCAGTATAATGCCATCAGATTCTTCATCACAATAGTTATTGGTGTTTTGTTTGGACTTATTTATTGGAAAAAAGGAGATAAGATAGAAAAGGAACAAGACCTTTTAAATCTTGTTGGCGCTATGTATTCCTCGGTTATTTTCCTTGGTGCATCCAACACAAGCAGTGTGCAACCTATTATTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCAGCTGGATTGTACTCAGAACTGCCCTATGCAATTGGTCAGATTGCGATTGAAGTAATTTATGTTGCAATTCAAAGTCTGATATACTCCACTATCCTCTACTGGATGATTGGGTTCCAACCACAAGCCGAAAACTTCTTTTGGTTCTACTTCTTCATATTCATGTCCTTTATCTACTTCACGCTATATGGAATGATGACGGTGGCCCTGACACCAAACCACCAAATCGCTGCCATCGTGATGTCTTTTTTCATCAGTTTTTGGAACCTATTCTCTGGTTTTCTTATTCCAAGAACGCAAATTCCAATATGGTGGAGATGGTATTATTGGGCATCTCCAGTGGCATGGACTATATATGGACTAGTGACATCGCAGGTGGGCGATAAGGATAGTCCAATAGAGGTACCTGGATATAGTCTCATGACAGTAAAAGATTATCTTGAGAGGCGATTGGGGTTTGAACATGACTTCCTTGGATTTGTTGTTTTGGCTCATATTGCTTTTTGCCTTCTCTTCCTTTTTGTATTTGCCTATGGCATCAAGTTTTTAAACTTCCAGAAAAGATAA 4401 0.3972 MEVETGEEDMVRAVSNGRVRKSFGELIQNSASFRERSVEEEPKWEALWRLPTYDRMRKVILKQVLENGEVKYEEVDITKLGGEEKKHILESIIKTAEVDNENFLQKMRDRIDRVGIEIPKIEVRFENLSVEGDAYDGTRALPTLINATLNIIEGLLSYIKILAFKKRVVKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYNGHELSEFVPQRTCAYISQYDLHHGEMTVRETLDFSGRCLGVGTRYDMLTELSRREKASAIKPDPEIDAFMKATSMEGQETSLVTDYILKILGLETCADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVAMIISLLQPAPETYNLFDDIVLLSEGEIVYQGPRENVLDFFQSVGFKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYQYVSVPDFVTHFNNYRIGKQLREEIQVPFDSSKTHHAALVKEKYGIPKWELFKACFSREWLFMKRSYFVYIFKTFQITIMSIITMTVFFRTKMEHGQLEDGGKFYGALFFSLINVMFNGAAELAMTVNRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSIVESVLWIVLTYYTIGFAPAPSRFFRQLLAFFCVNQMALSLFRFIAAIGRTRVVANTFASITILAVFVLSGFTVSRDDIGPWMIWCYYASPMMYGMTAISINEFLDKRWSTPNLDPRIDEPTVGKALLKARGIFTEDYWYWISIGALIGFSLLFNVCFILALTYLDPFRSSKSILVEQEDNRETTTTSSSVEKTTVEMTESSVSNVESFDVTTGVDMEVRNNTRSSIPKAAKNAKFRKGMVLPFQPLSLVFENVNYHIDMPNEMKKQGIEANRLQLLRNISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGHIEGSISISGYHKNQATFARISGYCEQNDIHSPNITVYESLLFSAWLRLSKEVDIETRKMFIEEVIELVELHLVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTIRNTVDTGRTVVCTIHQPSIDIFEHFDELLLLKTGGQVIYGGPLGRNSEKLIEYFEAITGIPKIEDGYNPATWMLEISSPVVESQLDIDFAELYNNSSLYEKSQELIKELSTPAPGTKDLYFPSKYSQPFLAQCNACFWKQYCSYWRNPQYNAIRFFITIVIGVLFGLIYWKKGDKIEKEQDLLNLVGAMYSSVIFLGASNTSSVQPIIAIERTVLYRERAAGLYSELPYAIGQIAIEVIYVAIQSLIYSTILYWMIGFQPQAENFFWFYFFIFMSFIYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKDSPIEVPGYSLMTVKDYLERRLGFEHDFLGFVVLAHIAFCLLFLFVFAYGIKFLNFQKR 1466
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03745 1466 Pfam ABC transporter 893 1044 IPR003439 GO:0005524
Vivi4g03745 1466 Pfam ABC-2 type transporter 1191 1402 IPR013525 GO:0016020|GO:0140359
Vivi4g03745 1466 Pfam ABC-2 type transporter 508 720 IPR013525 GO:0016020|GO:0140359
Vivi4g03745 1466 Pfam Plant PDR ABC transporter associated 733 790 IPR013581 -
Vivi4g03745 1466 Gene3D - 866 1114 IPR027417 -
Vivi4g03745 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 209 IPR027417 -
Vivi4g03745 1466 Pfam ABC transporter 172 352 IPR003439 GO:0005524
Vivi4g03745 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 874 1117 IPR003439 GO:0005524
Vivi4g03745 1466 MobiDBLite consensus disorder prediction 794 813 - -
Vivi4g03745 1466 FunFam ABC transporter G family member 40 879 1109 - -
Vivi4g03745 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 156 429 IPR003439 GO:0005524
Vivi4g03745 1466 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 21 1466 - -
Vivi4g03745 1466 FunFam ABC transporter G family member 34 159 463 - -
Vivi4g03745 1466 Pfam ABC-transporter N-terminal 96 147 IPR029481 -
Vivi4g03745 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 888 1101 IPR027417 -
Vivi4g03745 1466 CDD ABCG_PDR_domain2 862 1100 IPR034003 -
Vivi4g03745 1466 Pfam ABC-2 type transporter 387 441 IPR043926 GO:0140359
Vivi4g03745 1466 Pfam ABC-2 type transporter 1074 1145 IPR043926 GO:0140359
Vivi4g03745 1466 CDD ABCG_PDR_domain1 170 411 IPR034001 -
Vivi4g03745 1466 Gene3D - 161 456 IPR027417 -
Vivi4g03745 1466 MobiDBLite consensus disorder prediction 796 813 - -
Vivi4g03745 1466 SMART AAA_5 902 1094 IPR003593 GO:0016887
Vivi4g03745 1466 SMART AAA_5 181 406 IPR003593 GO:0016887
Vivi4g03745 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 428 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi4g03745 Vivi-Chr4 156367637 156375541 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03745 890 1077 Calmodulin-binding Proteins AT2G36910 26.108 4.86e-06 49.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03745 K08711 - gmx:100788067 2388.22