Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03725 ATGCTCCCTCATAACAACATCATCACTCTCCTCTTCCTCTATCACTGTCTCTGTCTCTCCATTATTCCTCTCACTTCATCTCTCAACTCAGACGGCCTCTCATTACTCGCCCTCAAAGCCGCAATCGACCTCGACCCCACCGGAATCCTCACCTCATGGTCCGACTCAGTTCCCACACCCTGCACCTGGGAAGGAGTATCATGCACCACCAACAACGACCGAGTCACTCAACTCACCCTCCCTTCAAAATCCCTCTCTGGCTACCTCCCCTCCGAGTTAGGCCAACTCACTGAACTCACCTCCCTCATTCTCCACAACAACAACTTCTCCAAAACCATTCCTTCATCACTCTTCAACACCACCAACAAACTCATCGTCTTAGATCTTTCTCACAACTCTCTCTCTGGTCCTCTTCCGTTGTCATTCACTTCACTCAAATCTCTCATCCATTGTGATTTATCTTCCAACTTTCTCAATGGCTCTATTCCAGACTCGTTAACCGAACTCACCGCTTTAACCGGTACTTTGAATCTCTCTTTTAATAGCTTCTCCGGTGGGATACCGGCTTCTTTAGGTAATCTTCCGGTGGAAGTTAGTTTGGATCTCCGTGATAATAATCTCACTGGGGAAATACCTCAGGTGGGGTCCTTGTTAAATCAAGGTCCCACCGCTTTTTCCGGGAATCCCGGACTTTGCGGGTTTCCGTTACGGGACCTTTGTCCGGATGGCGAAAGGGTTCCGGATCGTTTACCGGAAGATCCGAATCCGAACCCGATTGCTATTCAAACGGGTTCGGCTCAGGATCAGAAGCAGAAAAGTGGGCTGTTGGTTGTTGTGGTTGTGGTTTTGGTTTCTCTTGGGGCTGTGGTGGTTTTGATGTCGGTGTTGGCACTCCGGCGACGGAAGAGGTTGAATGAAGGGGAAGGGGAAGGTGGGTTTGAGAAGAGGAAGGTGGAGAGTGAGGTTTTGGGGTCTGGGGAAGAGCAGAAGGGGAGATTTGTGGTGTTGGATGAAGGGTTTGGGTTGGAATTGGAGGATTTGTTGAGGGCTTCTGCTTATGTGGTGGGGAAGAGTAGGAGTGGGATTGTGTATAAGGTTGTTGGTGTTGGGAAAGGGTTGGTTCCGGCGGGGACGGCGGTGGCTGTTCGGCGGCTGAGTGAGGGGGATGATGGAGGTTTAAGGTTTAAGGAATTTGAGTATGAGGTGGAAGGTATTGGGAGGGTGAGACACCCTAATGTTGTGCCTTTGAGAGCTTATTACTATGCAAGTGATGAGAAACTTCTCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGTTTTGCATGGTGGGCCATCCGATTCATTGCCACCATTATCATGGCCAGCAAGATTGAAAATTGCTCAAGGAACTGCAAGGGGATTGATGTACATACACGAGTTTAGTGGTAGGAAGTATGTCCACGGCAACATAAAATCAACGAAAATACTATTGGATGATGATCTCCATCCTTATATATCCGGTTTCGGACTTACCCGTCTTGGTTTAGGTATGTCAAAGTCTACCACCACTTTCACCCATAGGCGGCAAAATTCGAACCAGTCTATTGTAACCTCAGCAATGAGTTCAAAAGTTGCTGCTTCCTCTAAGAATTACACGGCACCCGAGTTGCTTATGACTGGAGCAAAGTTCACTCAGAAATGTGATGTGTATTCTTTTGGAATAGTGTTGTTAGAACTTTTGACAGGCCGGTTGCCGGATTTGGGACCAGAAAATGATCAGAAGGAGCTTGAGAGTTTTGTGAGGAAAGCATTTAGAGAGGAACAGCCCTTGTCAGAGATTATCGATCCAGCACTTCTGCCTGAGGTTAATGCGAAAAAACAGGTTGTTGCAGCGTTTCATGTTGCGCTGAACTGCACAGAACTTGATCCGGAATTGCGACCGAAAATGAGAACTGTGTCTGAGAGCCTTGATCACATCAAAATTCAGTAG 1974 0.4762 MLPHNNIITLLFLYHCLCLSIIPLTSSLNSDGLSLLALKAAIDLDPTGILTSWSDSVPTPCTWEGVSCTTNNDRVTQLTLPSKSLSGYLPSELGQLTELTSLILHNNNFSKTIPSSLFNTTNKLIVLDLSHNSLSGPLPLSFTSLKSLIHCDLSSNFLNGSIPDSLTELTALTGTLNLSFNSFSGGIPASLGNLPVEVSLDLRDNNLTGEIPQVGSLLNQGPTAFSGNPGLCGFPLRDLCPDGERVPDRLPEDPNPNPIAIQTGSAQDQKQKSGLLVVVVVVLVSLGAVVVLMSVLALRRRKRLNEGEGEGGFEKRKVESEVLGSGEEQKGRFVVLDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGVGKGLVPAGTAVAVRRLSEGDDGGLRFKEFEYEVEGIGRVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTVLHGGPSDSLPPLSWPARLKIAQGTARGLMYIHEFSGRKYVHGNIKSTKILLDDDLHPYISGFGLTRLGLGMSKSTTTFTHRRQNSNQSIVTSAMSSKVAASSKNYTAPELLMTGAKFTQKCDVYSFGIVLLELLTGRLPDLGPENDQKELESFVRKAFREEQPLSEIIDPALLPEVNAKKQVVAAFHVALNCTELDPELRPKMRTVSESLDHIKIQ 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03725 657 SUPERFAMILY L domain-like 30 238 - -
Vivi4g03725 657 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 655 IPR046959 -
Vivi4g03725 657 FunFam Leucine-rich repeat receptor-like protein kinase 147 242 - -
Vivi4g03725 657 Gene3D Phosphorylase Kinase; domain 1 341 432 - -
Vivi4g03725 657 FunFam Leucine-rich repeat receptor-like kinase 33 145 - -
Vivi4g03725 657 SUPERFAMILY Protein kinase-like (PK-like) 354 651 IPR011009 -
Vivi4g03725 657 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Vivi4g03725 657 Gene3D Transferase(Phosphotransferase) domain 1 433 657 - -
Vivi4g03725 657 Gene3D Ribonuclease Inhibitor 83 243 IPR032675 -
Vivi4g03725 657 Gene3D Ribonuclease Inhibitor 23 82 IPR032675 -
Vivi4g03725 657 ProSiteProfiles Protein kinase domain profile. 349 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03725 657 Pfam Protein kinase domain 355 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03725 Vivi-Chr4 156039330 156043167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03725 28 655 Receptor kinase-like Gene Family AT3G57830 57.716 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi4g03725 Pkinase 5.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03725 - - vvo:131595630 1189.1