Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03719 ATGCTCCCTCATAAAAACAACAACAACATTCACACTTCCATTTCCATTTCCAACATCATCACTCTCCTCTTCCTCTATCTCTATCTCTGTCTCTCCATTATTCCCCTCACTTCATCTCTCAACTCAGACGGCCTCTCATTACTCGCCCTAAAAGCCGCAATCGACCTCGACCCCACCGGAATCCTCACCTCATGGTCCGACTCAGTTCCCACACCCTGCAACTGGGAAGGAGTATCATGCACCACCAACAACGACCGAGTCACTCAACTCACCCTCCCTTCAAAATCCCTCTCTGGCTACCTCCCCTCCGAGTTAGGCCAACTCACTGAACTCACCTCCCTCATTCTCCACAACAACAACTTCTCCAAAACCATTCCTTCATCACTCTTCAACGCCACCAACAAACTCATCGTCTTAGATCTTTCTCACAACTCTCTCTCTGGTCCTCTTCCGTTGTCATTCACTTCACTCAAATCTCTCATCCATTGTGATTTATCTTCCAACTTTCTCAATGGCTCTATTCCAGACTCGTTAACCGAACTCACCGCTTTAACCGGTACTTTGAATCTCTCTTTTAATAGCTTCTCCGGCGGGATACCGGCTTCTTTAGGTAATCTTCCGGTGGAAGTTAGTTTGGATCTCCGTGATAATAATCTCACTGGGGAAATACCTCAGGTGGGGTCCTTGTTAAATCAAGGTCCCACTGCTTTTTCTGGGAATCCCGGACTTTGCGGGTTTCCGTTACGGGACCTTTGTCCGGATGGAGAAAGGGTTCCGGACCGTTTACCGGAAGATCCGAATCCGAACCCGATTGCTATTCAAACGGGTTCGGCTCAGGATCAGAAGCAGAGAAGTGGGCTGTTGGTTGTTGTGGTTGTGGTTTTGGTTTCTCTTGGGGCTGTGGTGGTTTTGATGTCGGTGTTGGTACTCCGGCGGCGGAAGAGGTTGAATGAAGGGGAAGAGGAAGGTGGGTTTGAAAAGAGGAAGGTGGAGAGTGAGGTTTTGGGTTCTGGGGAGGAGCAGAAGGGGAGATTTGTGGTGTTGGATGAAGGGTTTGGGTTGGAATTGGAGGATTTGTTGAGGGCTTCTGCATATGTGGTGGGGAAGAGTAGGAGTGGGATTGTGTATAAGGTTGTTGGTGTTGGGAAAGGGTTGGTTCCAGCGGGGACAGCGGTGGCTGTTCGGCGGCTGAGTGAGGGAGATGATGGAGGTTTAAGGTTTAAGGAATTTGAGTATGAGGTGGAAGGTATTGGGAGGGTGAGACACCCTAATGTTGTGCCTTTGAGAGCTTATTACTATGCAAGTGATGAGAAACTTCTCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGTTTTGCATGGCGGGCCATCCGATTCATTGCCACCATTATCATGGCCAGCAAGATTAAAAATTGCTCAAGGAACTGCAAGGGGATTGATGTACATACACGAGTTTAGTGGTAGGAAGTATGTCCACGGCAACATAAAATCGACAAAAATACTGTTGGATGATGATCTTCATCCTTATATATCCGGTTTCGGACTTACCCGTCTTGGTTTAGGTATGTCAAAGTCTACCACCACTTTCACACATAGGCGGCAAAATTCAAACCAGTCTATTGTAACCTCAGCAATGAGTTCAAAAGTTGCTGCTTCCTCTAAGAACTACATGGCACCCGAGTTGCGTGTGACTGGAGCAAAGTTCACCCAGAAATGTGATGTGTATTCTTTTGGTATAGTGTTGTTAGAACTTTTGACAGGCCGGTTGCCGGATTTGGGACCCGAAAATGATCAGAAGGAGCTTGAGAGTTTTGTGAGGATAGCATTTAGGGAGGAACAGCCCTTGTCAGAGATTATCGATCCAGCACTTCTGCCCGAGGTTAATGCGAAAAAACAGGTTGTTGCAGCATTTCATGTTGCGCTGAACTGCACAGAACTTGATCCGGAATTGCGACCGAAAATGAGAACTGTGTCTGAGAGCCTTGATCACATCAAAATTCAGTAG 2010 0.4721 MLPHKNNNNIHTSISISNIITLLFLYLYLCLSIIPLTSSLNSDGLSLLALKAAIDLDPTGILTSWSDSVPTPCNWEGVSCTTNNDRVTQLTLPSKSLSGYLPSELGQLTELTSLILHNNNFSKTIPSSLFNATNKLIVLDLSHNSLSGPLPLSFTSLKSLIHCDLSSNFLNGSIPDSLTELTALTGTLNLSFNSFSGGIPASLGNLPVEVSLDLRDNNLTGEIPQVGSLLNQGPTAFSGNPGLCGFPLRDLCPDGERVPDRLPEDPNPNPIAIQTGSAQDQKQRSGLLVVVVVVLVSLGAVVVLMSVLVLRRRKRLNEGEEEGGFEKRKVESEVLGSGEEQKGRFVVLDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGVGKGLVPAGTAVAVRRLSEGDDGGLRFKEFEYEVEGIGRVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTVLHGGPSDSLPPLSWPARLKIAQGTARGLMYIHEFSGRKYVHGNIKSTKILLDDDLHPYISGFGLTRLGLGMSKSTTTFTHRRQNSNQSIVTSAMSSKVAASSKNYMAPELRVTGAKFTQKCDVYSFGIVLLELLTGRLPDLGPENDQKELESFVRIAFREEQPLSEIIDPALLPEVNAKKQVVAAFHVALNCTELDPELRPKMRTVSESLDHIKIQ 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03719 669 Gene3D Phosphorylase Kinase; domain 1 353 444 - -
Vivi4g03719 669 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Vivi4g03719 669 Gene3D Ribonuclease Inhibitor 95 255 IPR032675 -
Vivi4g03719 669 Gene3D Ribonuclease Inhibitor 35 94 IPR032675 -
Vivi4g03719 669 Gene3D Transferase(Phosphotransferase) domain 1 445 669 - -
Vivi4g03719 669 ProSiteProfiles Protein kinase domain profile. 361 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03719 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 667 IPR046959 -
Vivi4g03719 669 Pfam Protein kinase domain 367 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03719 669 SUPERFAMILY Protein kinase-like (PK-like) 366 663 IPR011009 -
Vivi4g03719 669 FunFam Leucine-rich repeat receptor-like kinase 45 158 - -
Vivi4g03719 669 FunFam Leucine-rich repeat receptor-like protein kinase 159 254 - -
Vivi4g03719 669 SUPERFAMILY L domain-like 42 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03719 Vivi-Chr4 155868756 155872440 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03719 40 667 Receptor kinase-like Gene Family AT3G57830 58.025 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi4g03719 Pkinase 3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03719 - - vvo:131595630 1206.43