Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03709 ATGGTAAGCTTTATAGACATCCTCTATTGGGATGCTTTTGAGAGGCTTTGCCTGTACTTGAATGACCTCAAAGCTTTTCAAGGATCATTTGTGAAATTTTCAGACGAACAAGTGCAAGTGAAGGCTTATATATCACTAAAGACCACATTTGGATTAGAGGAAAATGCCAAGAAGATTAAGGTAAGGTACCTTGTTATAGAGTTATATTTACTTAGAAAAATGGATCATTTACTTGAGAGTCCTATTGAAAGTTTTGGGAATGAAACTGATCCCAATGAGCCAAGGAATAATGGTTCAGTAAGAAAGGAGAATGAAGGAAATGAAGTAAAAAAAGCAAAAAGAGTTGATAAGATCCCTAAGAATGATATTGATCTAAAGAGCTCAAAATATAGGGGTGTTATCAAATCCAATAATAATCGGTATGAAGCATTTGTTTGGGAAAATAACACGAGAAAAGGAGGGTGGGGAAAGACAGGGGAATTTGAAACTGAAATTGAAGCTGCCAAAGCTCATGATTTATTTGCTATTGAGAAATGGGGAGAATCTACTATTACAAATTTTCCACTGGATATATCCATCTCTTATTTGTTGTCTCTTACGACTGAGAATTCGACCCTTCGCATTACCAAGGTTAACTGGGCTCCTCATAAACAAGGGGAAAGAGTCAATGGTGATAAATGGGAAGCAAGATTGGAAATGGGAAACGGGAGGCCAGGCCATTACTTGGGAATATTTGACACTGAGGAAAAAGCTGCTAGAGCATATGATGCAGCAGCAAAAAGATTGATTGAAGATGATGCATATACTAATTTTTGTCATGATAATGGTAATGAAGATAATTTAGAAAACAAGGAGAGTAAAAATACAGTTTCAAATCAACAAGCTTTTGTTTCAAGTTCTTCAATGTCGAAGGAACAAGCCATAGTTATGGATGATAATGATGCTTATCAACACAATGACGAATACCAAAATCATAAAGCACTGCTGCATCAACATGATGACATCGACCCATCAGCTCCGATTGTGCTATATAATTTCATTTATAATTCGTTTTATGTAGTTGGAAAAGATGGAATAATCAATTCGGGAGACTCTTCAAACCAAGGAGCAGAAGATAATGGTAATGTTAATTCACTCCAAGATGCGAGTGATAATGAATAG 1161 0.3592 MVSFIDILYWDAFERLCLYLNDLKAFQGSFVKFSDEQVQVKAYISLKTTFGLEENAKKIKVRYLVIELYLLRKMDHLLESPIESFGNETDPNEPRNNGSVRKENEGNEVKKAKRVDKIPKNDIDLKSSKYRGVIKSNNNRYEAFVWENNTRKGGWGKTGEFETEIEAAKAHDLFAIEKWGESTITNFPLDISISYLLSLTTENSTLRITKVNWAPHKQGERVNGDKWEARLEMGNGRPGHYLGIFDTEEKAARAYDAAAKRLIEDDAYTNFCHDNGNEDNLENKESKNTVSNQQAFVSSSSMSKEQAIVMDDNDAYQHNDEYQNHKALLHQHDDIDPSAPIVLYNFIYNSFYVVGKDGIINSGDSSNQGAEDNGNVNSLQDASDNE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03709 386 SUPERFAMILY DNA-binding domain 128 190 IPR016177 GO:0003677
Vivi4g03709 386 Gene3D AP2/ERF domain 215 273 IPR036955 GO:0003700|GO:0006355
Vivi4g03709 386 Gene3D AP2/ERF domain 128 190 IPR036955 GO:0003700|GO:0006355
Vivi4g03709 386 MobiDBLite consensus disorder prediction 364 386 - -
Vivi4g03709 386 SMART rav1_2 220 278 IPR001471 GO:0003700|GO:0006355
Vivi4g03709 386 SMART rav1_2 129 194 IPR001471 GO:0003700|GO:0006355
Vivi4g03709 386 MobiDBLite consensus disorder prediction 82 113 - -
Vivi4g03709 386 CDD AP2 128 188 IPR001471 GO:0003700|GO:0006355
Vivi4g03709 386 Pfam AP2 domain 225 263 IPR001471 GO:0003700|GO:0006355
Vivi4g03709 386 MobiDBLite consensus disorder prediction 274 304 - -
Vivi4g03709 386 ProSiteProfiles AP2/ERF domain profile. 215 272 IPR001471 GO:0003700|GO:0006355
Vivi4g03709 386 ProSiteProfiles AP2/ERF domain profile. 129 188 IPR001471 GO:0003700|GO:0006355
Vivi4g03709 386 MobiDBLite consensus disorder prediction 286 304 - -
Vivi4g03709 386 MobiDBLite consensus disorder prediction 95 113 - -
Vivi4g03709 386 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 318 - -
Vivi4g03709 386 SUPERFAMILY DNA-binding domain 223 273 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03709 Vivi-Chr4 155776433 155785313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03709 115 271 AP2-EREBP Transcription Factor Family AT1G51190 31.638 3.32e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Vivi4g03709 AP2 0.00016 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03709 - K09284 vvo:131598144 776.933