Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03694 ATGTCTCTTGAAGAGTCTCTAAGATCTCTCTCCCTTGACTACCTGAACCTCCTGATCAACGGGCAAGCCTTCAGCGACGTGACTTTCCAAGTGGAAGGTCGTCTGGTTCACGCTCATCGCTGCATCTTAGCAGCAAGGAGTCTCTTTTTCAGGAAATTCTTTTGTGGGCCCGATCCACCGTCGGGTCTAGACCCAACAGGAGGAGGATCCTCTCGACAATCAACAGCAAGACCCGGCGTCATCCCGGTGAACTCGGTTGGATACGAGGTGTTCCTCCTCCTGTTGCAGTTTCTGTACAGTGGACAAGTTTCTATTGTTCCTCACAAACATGAACCTAGACCTAATTGCGGTGAGAGAGGTTGCTGGCATACGCATTGTAGCTCAGCTGTCGATCTTGCACTTGACACCCTCGCTGCTGCTAGATACTTTGGTGTTGAACAGCTTGCATTGCTCACTCAGAAGCAACTAGCAAGCATGGTGGAGAAAGCTTCCATAGATGATGTGATGAAAGTACTAATAGCTTCAAGAAAGCAAGAAATGAACCAACTTTGGACAACATGTTCCCACCTTGTTGCCAAGTCAGGTCTCCCACCCGAAATCCTAGCCAAGCATCTTCCTATTGACGTAGTTGCCAAAATAGAAGAGCTTCGTCTCAAATCATCCTTAGCTCGCCGCTCCTTAATGCCACTCCATCATCACCATCACCATCACCACCACCACGACCTGGGAGATCTAGAGGACCAGAAAATACGCCGAATGAGGCGCGCTCTTGACTCGTCGGACGTAGAACTGGTCAAACTCATGGTCATGGGAGAAGGCCTAAACCTGGATGAAGCATTGGCATTACACTATGCAGTTGAGAATTGCAGCAGAGAAGTGGCGAAAGCCTTGCTCGAACTCGGTGCTGCTGATGTTAACTACCCGGCTGGACCTGCCGGGAAAACTCCGCTTCACGTGGCCGCCGAGATGGTGTCGCCGGAAATGGTGGCAGTTTTGCTTGATCACCATGCAGACCCCACAGTAAGAACCGTTGATGGTGTGACACCTTTGGATATACTCAGAACCCTAACTTCTGATTTTCTCTTCAAAGGTGCTGTTCCTGGATTAACCCACATTGAACCAAACAAGTTAAGATTGTGTTTGGAACTTGTTCAATCCGCAGCTCTTGTTCTCTCACGTGAAGAAAACAATACCAACAACAACAATAACAATGCTTCTTCATCATCAGCACAGATTTACCCTCCAATGAGTGAAGATCATAGCAGCAGCAGTAGTGGAAACAACAATAACAACAACATTGGTAACCTGAATTTGGATTCAAGATTGGTGTATCTGAACCTTGGTGCTACTCAAATGAGTGGTGGTGGTGATGATGACAGTGGACACAATAGTCAAAGGGAAGGCATGAATCGTCATGGATCTCAATCTGGTCATGGATGTGACCCAACAATGTATCATCACTCTCATGATTTCTAA 1476 0.4743 MSLEESLRSLSLDYLNLLINGQAFSDVTFQVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPTGGGSSRQSTARPGVIPVNSVGYEVFLLLLQFLYSGQVSIVPHKHEPRPNCGERGCWHTHCSSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIDDVMKVLIASRKQEMNQLWTTCSHLVAKSGLPPEILAKHLPIDVVAKIEELRLKSSLARRSLMPLHHHHHHHHHHDLGDLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVAKALLELGAADVNYPAGPAGKTPLHVAAEMVSPEMVAVLLDHHADPTVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREENNTNNNNNNASSSSAQIYPPMSEDHSSSSSGNNNNNNIGNLNLDSRLVYLNLGATQMSGGGDDDSGHNSQREGMNRHGSQSGHGCDPTMYHHSHDF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03694 491 CDD BTB_POZ_NPR_plant 8 160 - -
Vivi4g03694 491 MobiDBLite consensus disorder prediction 449 491 - -
Vivi4g03694 491 SMART BTB_4 25 160 IPR000210 GO:0005515
Vivi4g03694 491 FunFam regulatory protein NPR5 isoform X1 4 193 - -
Vivi4g03694 491 Pfam BTB/POZ domain 16 111 IPR000210 GO:0005515
Vivi4g03694 491 ProSiteProfiles Ankyrin repeat profile. 312 344 IPR002110 GO:0005515
Vivi4g03694 491 FunFam regulatory protein NPR5 isoform X2 243 360 - -
Vivi4g03694 491 Gene3D Potassium Channel Kv1.1; Chain A 3 193 IPR011333 -
Vivi4g03694 491 ProSiteProfiles Ankyrin repeat region circular profile. 312 338 - -
Vivi4g03694 491 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 491 IPR044284 GO:0099402
Vivi4g03694 491 Pfam Domain of unknown function (DUF3420) 195 254 IPR024228 -
Vivi4g03694 491 SUPERFAMILY Ankyrin repeat 270 355 IPR036770 -
Vivi4g03694 491 ProSiteProfiles BTB domain profile. 25 107 IPR000210 GO:0005515
Vivi4g03694 491 MobiDBLite consensus disorder prediction 395 434 - -
Vivi4g03694 491 Pfam Ankyrin repeats (3 copies) 260 342 IPR002110 GO:0005515
Vivi4g03694 491 Gene3D - 245 360 IPR036770 -
Vivi4g03694 491 SMART ANK_2a 277 307 IPR002110 GO:0005515
Vivi4g03694 491 SMART ANK_2a 312 341 IPR002110 GO:0005515
Vivi4g03694 491 SUPERFAMILY POZ domain 9 158 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03694 Vivi-Chr4 155610186 155613467 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi4g03694 BTB 1.7e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03694 K14508 - qsu:112012060 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03694 4 155610186 155613467 Vivi4g03694 4 155610186 155613467 ECH
Vivi4g03694 4 155610186 155613467 Vivi4g03694 4 155610186 155613467 PCT