Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03683 ATGGCTAGCAGAAAGAAAGAGAGGGAGGAGAAAGACATTGAGTTTATGTTTAACGAGGAGGAGGATGTTGAGGAGGAACATGATATTGAAACTGTGAAGGTAGAGTCTGCAGACAGTGGTAGCAGTGATGATCATTACGATGACGATGACGATGATGATGGAAATCATGCATTTCAGCCTCACTCTTTCACTTCCAATCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACTGCTCCAAGTTTTGGATCGTTTCTACGAGCACCGAGTTTTATATATTCAAGCTTTGGCAATCGATCGAAGAGTAACTTGGACATAGATGGAAAATCTCCGTTTCTATCCAGTCATGAGAAAGGCTCAATGCAAAATCTTGCTGGAGAAATGCCTATTGGTCATGGTTGCAGCTTAACTCAAACAATTTTCAATGCGATTAATGTGATGGCTGGAGTTGGCCTTATATCGGTACCTTATACATTGAAACAAGCCGGTTGGGCGAGCATGTTGGTGATGACTCTTTTCGCAGTTGTTTGTTGTTATACAGCCATGCTTATGAGACAATGCTTTGAAAGTAGAGAAGGACTCACTAGCTACCCTGATATAGGAGAAGCTGCATTTGGTAGATATGGTCGAATTTTCGTATCCATCATTTTGTACACTGAGTTATATTCATATTGTGTGGAATTCATCACTTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAACATCGTTAGATATAGGAGGTCTCCATTTAGATTCCATGCACTTGTTTGGAGTTCTTACTGCACTTATTGTTCTCCCTACAGTTTGGTTGAAGGATCTCCGAGTAATCTCGTATCTATCAGTTGGAGGGATTGTAGCAACAATATTGATTATTATTTGTGTGTTATCGGTCGGGACAACGGTTGGATTCCATCATACTGGTCAAGTGGTGAATTGGAGTGGCATTCCATTTTCTATTGGTGTCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTAACAAAAAACAGTATACCACAGCATTGATAACATGTTTTGCTTTGTGTATTTTGATATACGGAAGCGTCGCAATCATGGGATTTCTCACATTTGGCGATAACACTTTGTCTCAGATAACATTGAATATGCCGGCAGGTGCATTTGCTTCTAAAGTTGCATTGTGGACAACAGTAATTAATCCATTCACTAAATATGCTTTGTTGATGAATCCGTTGGCAAGGTGTCTAGAGGAATTGCTGCCAGAAAGAATTTCAAGTACTTATTGGTGTTTTATTCTTCTTAGAACAGTACTTGTGGCATCTACGGTTTGTGCGGCTTTTCTGATTCCGTTTTTCGGACTTGTGATGGCTTTGATAGGTTCTCTCTTCAGTATGCTTGTGTCAGTGATTATGCCCAGTTTATGCTTTTTAAAAATTGTGGGGAAGAAGGCTACAAATACACAGGTTACCGTGAGCGTCATAATTGCTGCAGCTGGAATGATTTGTGGACTCCTTGGAACATATTCCTCTTTGTTGAATATTGCCAATAGTTACTAA 1578 0.3986 MASRKKEREEKDIEFMFNEEEDVEEEHDIETVKVESADSGSSDDHYDDDDDDDGNHAFQPHSFTSNQWPQSYKETTDSYTIATAPSFGSFLRAPSFIYSSFGNRSKSNLDIDGKSPFLSSHEKGSMQNLAGEMPIGHGCSLTQTIFNAINVMAGVGLISVPYTLKQAGWASMLVMTLFAVVCCYTAMLMRQCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDIGGLHLDSMHLFGVLTALIVLPTVWLKDLRVISYLSVGGIVATILIIICVLSVGTTVGFHHTGQVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMANKKQYTTALITCFALCILIYGSVAIMGFLTFGDNTLSQITLNMPAGAFASKVALWTTVINPFTKYALLMNPLARCLEELLPERISSTYWCFILLRTVLVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGKKATNTQVTVSVIIAAAGMICGLLGTYSSLLNIANSY 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03683 525 FunFam Amino acid transporter AVT1A 137 524 - -
Vivi4g03683 525 PANTHER OS05G0424000 PROTEIN-RELATED 147 506 - -
Vivi4g03683 525 Gene3D Amino acid/polyamine transporter I 138 524 - -
Vivi4g03683 525 MobiDBLite consensus disorder prediction 1 70 - -
Vivi4g03683 525 MobiDBLite consensus disorder prediction 14 28 - -
Vivi4g03683 525 Pfam Transmembrane amino acid transporter protein 139 516 IPR013057 -
Vivi4g03683 525 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03683 Vivi-Chr4 155446324 155457569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03683 67 460 Amino Acid or Auxin Permease AAAP Family AT2G41190 66.504 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03683 K15015 - gmx:100790344 783.867