Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03683 ATGGCTAGCAGAAAGAAAGAGAGGGAGGAGAAAGACATTGAGTTTATGTTTAACGAGGAGGAGGATGTTGAGGAGGAACATGATATTGAAACTGTGAAGGTAGAGTCTGCAGACAGTGGTAGCAGTGATGATCATTACGATGACGATGACGATGATGATGGAAATCATGCATTTCAGCCTCACTCTTTCACTTCCAATCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACTGCTCCAAGTTTTGGATCGTTTCTACGAGCACCGAGTTTTATATATTCAAGCTTTGGCAATCGATCGAAGAGTAACTTGGACATAGATGGAAAATCTCCGTTTCTATCCAGTCATGAGAAAGGCTCAATGCAAAATCTTGCTGGAGAAATGCCTATTGGTCATGGTTGCAGCTTAACTCAAACAATTTTCAATGCGATTAATGTGATGGCTGGAGTTGGCCTTATATCGGTACCTTATACATTGAAACAAGCCGGTTGGGCGAGCATGTTGGTGATGACTCTTTTCGCAGTTGTTTGTTGTTATACAGCCATGCTTATGAGACAATGCTTTGAAAGTAGAGAAGGACTCACTAGCTACCCTGATATAGGAGAAGCTGCATTTGGTAGATATGGTCGAATTTTCGTATCCATCATTTTGTACACTGAGTTATATTCATATTGTGTGGAATTCATCACTTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAACATCGTTAGATATAGGAGGTCTCCATTTAGATTCCATGCACTTGTTTGGAGTTCTTACTGCACTTATTGTTCTCCCTACAGTTTGGTTGAAGGATCTCCGAGTAATCTCGTATCTATCAGTTGGAGGGATTGTAGCAACAATATTGATTATTATTTGTGTGTTATCGGTCGGGACAACGGTTGGATTCCATCATACTGGTCAAGTGGTGAATTGGAGTGGCATTCCATTTTCTATTGGTGTCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTAACAAAAAACAGTATACCACAGCATTGATAACATGTTTTGCTTTGTGTATTTTGATATACGGAAGCGTCGCAATCATGGGATTTCTCACATTTGGCGATAACACTTTGTCTCAGATAACATTGAATATGCCGGCAGGTGCATTTGCTTCTAAAGTTGCATTGTGGACAACAGTAATTAATCCATTCACTAAATATGCTTTGTTGATGAATCCGTTGGCAAGGTGTCTAGAGGAATTGCTGCCAGAAAGAATTTCAAGTACTTATTGGTGTTTTATTCTTCTTAGAACAGTACTTGTGGCATCTACGGTTTGTGCGGCTTTTCTGATTCCGTTTTTCGGACTTGTGATGGCTTTGATAGGTTCTCTCTTCAGTATGCTTGTGTCAGTGATTATGCCCAGTTTATGCTTTTTAAAAATTGTGGGGAAGAAGGCTACAAATACACAGGTTACCGTGAGCGTCATAATTGCTGCAGCTGGAATGATTTGTGGACTCCTTGGAACATATTCCTCTTTGTTGAATATTGCCAATAGTTACTAA 1578 0.3986 MASRKKEREEKDIEFMFNEEEDVEEEHDIETVKVESADSGSSDDHYDDDDDDDGNHAFQPHSFTSNQWPQSYKETTDSYTIATAPSFGSFLRAPSFIYSSFGNRSKSNLDIDGKSPFLSSHEKGSMQNLAGEMPIGHGCSLTQTIFNAINVMAGVGLISVPYTLKQAGWASMLVMTLFAVVCCYTAMLMRQCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDIGGLHLDSMHLFGVLTALIVLPTVWLKDLRVISYLSVGGIVATILIIICVLSVGTTVGFHHTGQVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMANKKQYTTALITCFALCILIYGSVAIMGFLTFGDNTLSQITLNMPAGAFASKVALWTTVINPFTKYALLMNPLARCLEELLPERISSTYWCFILLRTVLVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGKKATNTQVTVSVIIAAAGMICGLLGTYSSLLNIANSY 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03683 525 FunFam Amino acid transporter AVT1A 137 524 - -
Vivi4g03683 525 PANTHER OS05G0424000 PROTEIN-RELATED 147 506 - -
Vivi4g03683 525 Gene3D Amino acid/polyamine transporter I 138 524 - -
Vivi4g03683 525 MobiDBLite consensus disorder prediction 1 70 - -
Vivi4g03683 525 MobiDBLite consensus disorder prediction 14 28 - -
Vivi4g03683 525 Pfam Transmembrane amino acid transporter protein 139 516 IPR013057 -
Vivi4g03683 525 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03683 Vivi-Chr4 155446324 155457569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03683 67 460 Amino Acid or Auxin Permease AAAP Family AT2G41190 66.504 0.0 576