Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03670 ATGGCAAAGAGGAAGAGCTTGTTTGGATGGGTGAAAAGCCTATTCCTTTCTGAGTCAAAGGACAAAAACCAGAAGAAATGGGGATGGAGATTAGGAAGGATTAAACAGAAGCAGTACCCTACAATAACAGCTTCGAAAAGGACATTGATTGAAGCAAATGCAGAACAAAGAAAGCATGCTTTAGCAGTGGCTATTGCAACAGCATCTGCTGCAGAGGCTGCAATCGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACAAGCGGTGCCTCTCGTTCGTATGCATATCTCTCGAACGGAAACAGAAGTTTGGCTGCCATCAAGATTCAAAGCGTTTATCGTGCACATCTCGCTAGGAAAGCGTTAAGAGCGTTGAAGGGAGTTATAAGACTACAGGCCATAATTCGCGGTGAAGCTGTTAGGCGTCAAGTGTCCCGATCTTTGATGAATGTTCCCTCAAATGCGAAAATTCAGAAGGAAAATCAGGGCAGAAACAGCCATACTGAAGAAGAAAACTGCAAAAATGGTCAGATAAAACAGTTTCCAAAGGAAAAGAAAAAGTTAGAAGAGAATGACCTTAAGGCTGAATGCTATAGTCAAAGAACATGGAATTGTAGCTCACACTCAAGAGAAGACATTGAAGCTATATGGTTAAGAAAGCAAGAGGCTATTGTCAAAAGAGACCGCATGAGACAATACTCATCTTCACAAAAGGAGAGAACATTTTCTCAAAGGGTGGAAGAAATCGGAGGAGATAGCTGTCGTACTTTAGGAGAATGGTTACATAAAGAAATAACTGATTGGGATGTTCTTTATAAACCTGTTCGAAAAAATCAATTTCAATCGAATGGATCGAGGCTAAATCGTGAACGGAATCACTTTCCTTAA 891 0.4153 MAKRKSLFGWVKSLFLSESKDKNQKKWGWRLGRIKQKQYPTITASKRTLIEANAEQRKHALAVAIATASAAEAAIAAAHAAAEVVKLTSGASRSYAYLSNGNRSLAAIKIQSVYRAHLARKALRALKGVIRLQAIIRGEAVRRQVSRSLMNVPSNAKIQKENQGRNSHTEEENCKNGQIKQFPKEKKKLEENDLKAECYSQRTWNCSSHSREDIEAIWLRKQEAIVKRDRMRQYSSSQKERTFSQRVEEIGGDSCRTLGEWLHKEITDWDVLYKPVRKNQFQSNGSRLNRERNHFP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03670 296 Gene3D - 102 151 - -
Vivi4g03670 296 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Vivi4g03670 296 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Vivi4g03670 296 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Vivi4g03670 296 SMART iq_5 102 124 IPR000048 GO:0005515
Vivi4g03670 296 MobiDBLite consensus disorder prediction 157 177 - -
Vivi4g03670 296 MobiDBLite consensus disorder prediction 163 177 - -
Vivi4g03670 296 PANTHER IQ-DOMAIN 5-RELATED 6 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03670 Vivi-Chr4 155351674 155353385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03670 1 261 IQD Protein Family AT5G03960 45.714 3.30e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03670 - - vvo:131600024 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03670 4 155351674 155353385 Vivi4g03670 4 155351674 155353385 ECH