Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03666 ATGACTTCTTCTTCTGAGTCAAACTCAAAGCATCAAGTTTTTCTCAACTTTAGAGGGGAAGATACTAGATGCAATTTTACAAGCCATCTCTATGCTGCATTGCGTGGAAAAAACATCCAAACATTCATGGATGATAAGCAAATTCAGAGAGGAGATGGTATCTCACCAACACTCCTCTCAGCTATTGAAAACTCCAACATTTGCGTAACAATTTTCTCGCAAGATTATGCTTCTTCTACATGGTGTTTGGATGAACTCGCGAAGATCATTGAATGCAATGACAAGAAAAAACTTATTGTCATACCTGTTTTCTATCACATTGATCCATCTCATGTGAGACACCAAAGGGGAACCTACCAAGATGCCTTTGCCAAACACGAGGAGCGTTTCAATGACAATCTAATCAAGGTACACAAGTGGAGAACTTCCTTGCATAAAGCTGTTAACTTAGCGGGATGGATTTCCTCAAAAAATAGGTCTGAGGCAGTACTAGTTAAAGAAATTGTTGAAGTTATATTAGATAAACTGAAATGTATGGGCCCAAGTGTTCTAAAGAAGGGGCTTGTTGGAATTTCTCGACACATTGCACATGTGGAATCATTGTTATGCTCTGGGCCAGCTGACGTGCATATTATTGGAATTTGGGGTATGGGCGGTATAGGCAAGACAACCACTGCAGATGCTGTGTTTGCAAAAGTCTCTTATCAATACGAGGGATGTTACTTTGTTGCCAATGTCAGGGAAAAATGGAGAAATCAAATAAAGTTGCGGAATAAAGTTCTGGCACAGGTGTTAGGGGACCAAAGCATTGATATTAACACCCCTACTATGAGTTCCAGGTTTGTGGTTGAAAGACTTAAATGTAAAAAGGTCCTTGTCGTTCTTGATGACGTGAGTTTATCCGAACAAATAGAATATCTTGTTGGAGGGCGAGATTGGTTTGGACCAGGCAGTCGAATCATAGTGACAACCCGAAACAAAGAAGTATTTAATGGTGGAGTTGATGGAGTATACCAAGTGATGGCATTGAATTCTCGTGAAGCACTGGAGCTTTTTAGCTTCAATGCCTTTCAACAAGACTGTCCACCAATGGAATACCAATACTTGACAGAAAGGGCAGTAGACTATGCTAAGGGCATTCCTCTAGCTCTTAAAATTCTGGGATCACATCTTCGTTTCAAACGACCAAAAGAATGGGAGAGTGCATTAGAAAAACTGAAGAAAATTCCCAAAGCTGAAATTTATGATGTGTTGAGATTGAGTTATGAAGGATTAGACCCTGAAGAGCAGAATATATTTTTAGACATAGCCTGCTGTTTGAAAGGAGAAACAAAAAGCCAAATAGCAAGTATATTAGATGCTTGTGGCTTCTCTACGGAAATTGGGATGAGAAGCCTTGAAGACAAGTCTCTTGTAACTGTTTCTAAAAACAACACAGTACATATGCATGATTTGTTACAAGAAATGGGACGATATGTAGAATATATGAAAAAGCCTGAAGAACGAAGTCGGTTGTGGGATCCTAAAGAAGTTTACAATGTCCTAAAGTATTGCAAGGGTATTGAAAGTATTGAATGCATTGTCTTGGACATGTCACAAATCAAAGAGTTGACATTAAGCCCTCAAACATTTCAAAGAATGTACAGGCTAAGGCTTTTGAAATTTTATATACCCTCAGGCGATACGAGAAGAATCAATGTGCATATTTCCAGAGGTCTTGATTGCATGCCTGATGAAATAAGTTATTTCAGATGGGACTGTTTTCCATTTAAATCCTTGCCACCACGGTTTTGTGCTGAGAAGCTTGTTGAACTTGATATAAAACATAGCCGAATTGCAAAGCTCTGGGATGGAGTGCAGGATCTTGTGAATTTGAAGTCGTTATGCCTAAGCGGTTGCAAGAACTTGGTTGAGCTCTCAGATTTGTCTTTTGCCTCAAAACTAGAAAAAGTACATCTTGATGATTGTACAAGCTTGTTGAATGTTCCTTCATATATTTTGTCACTCGATAGTCTGCTTGCAATAAATCTGAGAAGCTGTAAACAACTTTGTCACATTGAAAGTGAGAAACAATCTAAATCTCTTCGATGGCTTAATCTAAGAGGGTGCTCAAGACTCACAAATTATTCAGTTGTTTCAGAGGAACTGGAGTACTTGAACTTAGATTACACGGCAATTAAAGAACTCCCTGACAACCTCAGCCTCTTACCGAAGTTAAATAAACTCTCATTAAGAGGTACTAATATTGAGACCTTGCCTGGTAGCATACAATATCTCTTCTTGTTGAGAGCTCTCGACGTAAGCAACTGCAGGAGGCTTCGTTCTTTGCCTAAGCTCCCGTTCTTGCTACAAGACTTGAATGTAAGCAATTGCATTTCCTTAGAAACAGTATCAAATTTAGGGATCAGAATGTTGCAAGATTCTTTTGGTAGGCTAAAGAAGAGAACATTGCTGAGACAGATTCACGAGGAAGAAAAAATGTCTCTTCGTCATCAAAAGTATTTGGGTAGATTTGAGTTTCATAATTGCATAAAGTTGGATCAGACAGCAGGCAGAACTGTTCTGGAGGAGGCACTTATTAGAATTCAGCTAGCAGCCTACCTGTCATTGAAGTTTGAAGAATGTTATGTAACTGATGATGAAGTTTTTGATAACTTTGACCCTGAAGATTTTGTACGTATATCCCGGCCCATTTATAGTATTTTAGTGGGAAATGAAGTACCAGATTGGTTCATGCATAAAAGAACAGACTCCTTGGTCATCCCTATTGAACTTTCTCCACTGCGCCATTTTAGGGACAGATTTCTGGGGTTTGCCTTCTGCCTTGTTCTTGGAGCATCCAAATCAAAAAGGAAGAATATTCGCCGTACTGGTCTTATGGCGGGGTGTAGATACTATTTTGAAGGCAAATATGAGGGAACTTCCATTATGAAGTCTTGTTGTAGTGATGCTGAATTAGATCAGGTATGGGTTTGGTATGACCAAATTTTTGATGTTGCAGATCTCACAAGGAATATTCCATGGAAGCTTTCCTTCGAGTTTTTTGTTTTGTCAGGTAGTTCAAGATCTGTAGTGAAACAGTGCGGAATTCGACCATTGTATGCTCCATTTGACATCATGCAAAGCCTAAATGAAGAAGTAAGCAGAGAAGCTAAGAGAGCTTACCATGATGTTGAATACAACAGAATTCCAAGGGAATACTGGCTTCTTCGCCACTATGCTCATCCTCTTGACCGCCTTGGATTTCCTTCAAAACAACCAAGGATTTCTGAGTCTCATGATGGACAATTTGGGGAACCTATTCCACTAACTTATTGTGCTGATAGTGTTGATGAAATTCAAATGGAACATGCCTGCATTGATGATATTCATGCTGAAGTACTGGTTTATTTTGGGGTTAATGGTAGTAACCACCGCCAACCACGTTTGCTGCGTTTAGCCCAACTGCTTCTGAATGACTACTGCTATTTTGGTGAACTCTCGGACAATATCGACATCTTTTCATCCCTGAGACTTTTGTCAATACATTGTTGCAATATTGAGAGCTTGCCTGCTAGAATCAGAAATCTTTCAAGGCTGGAATATCTTAAATTTTATGACTGCAAGAGGCTGAGGTTTCTCTCCAATCTTCCACCATCCCTACAAACTTTGTTTGTTACTAACTGCACATCTCTGGAGACGGTTGAATTTTCTGAGGAATACAACATGGATGTTGGTGTTGATAGAATTTTTCGCTACAAAATGTCCGGTTGGCTGATTGGAAAAGTATCGAGAATACAAGTTACTGAGCCAGCAGGAAATGTCATAAACTGGTGGTTCATGCAAAAAAACTGGTACTTCCATGGCCACTATTAA 3855 0.3938 MTSSSESNSKHQVFLNFRGEDTRCNFTSHLYAALRGKNIQTFMDDKQIQRGDGISPTLLSAIENSNICVTIFSQDYASSTWCLDELAKIIECNDKKKLIVIPVFYHIDPSHVRHQRGTYQDAFAKHEERFNDNLIKVHKWRTSLHKAVNLAGWISSKNRSEAVLVKEIVEVILDKLKCMGPSVLKKGLVGISRHIAHVESLLCSGPADVHIIGIWGMGGIGKTTTADAVFAKVSYQYEGCYFVANVREKWRNQIKLRNKVLAQVLGDQSIDINTPTMSSRFVVERLKCKKVLVVLDDVSLSEQIEYLVGGRDWFGPGSRIIVTTRNKEVFNGGVDGVYQVMALNSREALELFSFNAFQQDCPPMEYQYLTERAVDYAKGIPLALKILGSHLRFKRPKEWESALEKLKKIPKAEIYDVLRLSYEGLDPEEQNIFLDIACCLKGETKSQIASILDACGFSTEIGMRSLEDKSLVTVSKNNTVHMHDLLQEMGRYVEYMKKPEERSRLWDPKEVYNVLKYCKGIESIECIVLDMSQIKELTLSPQTFQRMYRLRLLKFYIPSGDTRRINVHISRGLDCMPDEISYFRWDCFPFKSLPPRFCAEKLVELDIKHSRIAKLWDGVQDLVNLKSLCLSGCKNLVELSDLSFASKLEKVHLDDCTSLLNVPSYILSLDSLLAINLRSCKQLCHIESEKQSKSLRWLNLRGCSRLTNYSVVSEELEYLNLDYTAIKELPDNLSLLPKLNKLSLRGTNIETLPGSIQYLFLLRALDVSNCRRLRSLPKLPFLLQDLNVSNCISLETVSNLGIRMLQDSFGRLKKRTLLRQIHEEEKMSLRHQKYLGRFEFHNCIKLDQTAGRTVLEEALIRIQLAAYLSLKFEECYVTDDEVFDNFDPEDFVRISRPIYSILVGNEVPDWFMHKRTDSLVIPIELSPLRHFRDRFLGFAFCLVLGASKSKRKNIRRTGLMAGCRYYFEGKYEGTSIMKSCCSDAELDQVWVWYDQIFDVADLTRNIPWKLSFEFFVLSGSSRSVVKQCGIRPLYAPFDIMQSLNEEVSREAKRAYHDVEYNRIPREYWLLRHYAHPLDRLGFPSKQPRISESHDGQFGEPIPLTYCADSVDEIQMEHACIDDIHAEVLVYFGVNGSNHRQPRLLRLAQLLLNDYCYFGELSDNIDIFSSLRLLSIHCCNIESLPARIRNLSRLEYLKFYDCKRLRFLSNLPPSLQTLFVTNCTSLETVEFSEEYNMDVGVDRIFRYKMSGWLIGKVSRIQVTEPAGNVINWWFMQKNWYFHGHY 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03666 1284 Gene3D - 182 334 IPR027417 -
Vivi4g03666 1284 Gene3D Ribonuclease Inhibitor 1121 1236 IPR032675 -
Vivi4g03666 1284 Gene3D Ribonuclease Inhibitor 514 707 IPR032675 -
Vivi4g03666 1284 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Vivi4g03666 1284 Pfam NB-ARC domain 198 408 IPR002182 GO:0043531
Vivi4g03666 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 795 IPR044974 GO:0006952
Vivi4g03666 1284 Gene3D Ribonuclease Inhibitor 712 896 IPR032675 -
Vivi4g03666 1284 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Vivi4g03666 1284 Gene3D - 4 180 IPR035897 -
Vivi4g03666 1284 SUPERFAMILY "Winged helix" DNA-binding domain 413 516 IPR036390 -
Vivi4g03666 1284 Pfam C-JID domain 903 1035 IPR045344 -
Vivi4g03666 1284 PRINTS Disease resistance protein signature 620 636 - -
Vivi4g03666 1284 PRINTS Disease resistance protein signature 377 391 - -
Vivi4g03666 1284 PRINTS Disease resistance protein signature 211 226 - -
Vivi4g03666 1284 PRINTS Disease resistance protein signature 285 299 - -
Vivi4g03666 1284 Pfam TIR domain 10 190 IPR000157 GO:0007165
Vivi4g03666 1284 SUPERFAMILY L domain-like 528 1228 - -
Vivi4g03666 1284 Gene3D - 342 426 IPR042197 -
Vivi4g03666 1284 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 178 - -
Vivi4g03666 1284 SMART till_3 10 150 IPR000157 GO:0007165
Vivi4g03666 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03666 Vivi-Chr4 155266878 155273660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03666 7 804 WRKY Transcription Factor Family AT4G12020 31.863 1.31e-102 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03666 - - tpra:123891409 1572.76