Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03653 ATGGCAAAGAGGAAGAGCTTGTTTGGATGGGTGAAAAGCCTATTCCTTTCTGAGTCAAAGGACAAAAACCAGAAGAAATGGGGATGGAGATTAGGAAGGATTAAACAGAAGCAGTACCCTACGATAACAGCTTCGAAAAGGACATTGATTGAAGCAAATGCAGAACAAAGAAAGCATGCTTTAGCAGTGGCTATTGCAACAGCATCTGCTGCAGAGGCTGCAATCGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACGGGCGGTGCCTCTCGTTCGTATTCATATCTTTCCCAGGGAAACAGAAGTTTGGCTGCCATCAAGATTCAAAGCGTTTATCGTGCACATCTCGCTAGAAAAGCATTAAGAGCATTGAAGGGGGTTATAAGACTACAGGCCATAATTCGCGGTCAAGCTGTTAGGCGTCAAGTGTCCCGATCTTTGAAGAATGTTCCCTCAAATGCAAAAATTCAGAAGGAAAATCAGGACAGAAACAGCCATACTGAAGAAGAAAACAATAAAAATGGTCAGATAAAACAGTTTCCAAAGGAAAAGAAAAAGTTAGAAGAGAATGACCTTAAGGCTGAATGCTATAGTCAAAGAACATGGAATTGTAGCTCACACTCAAGAGAAGACATTGAAGCTATATGGTTAAGAAAGCAAGAGGCTATTGTCAAAAGAGACCGCATGAGACAATACTCATCTTCACAAAAGGAGAGAACATTTTCTCAAAGGGCGGAAGAAATCGGAGGAGATAGCTGTCGTACTTTAGGAGAGTGGTTACATAAAGAAATAAGTGATTGGGATGTTCTTTATAAACCATCTCATCTTTCAAATATTACAATAAAAAATGAAGTGCAAGAAGAATTGGGTTCAAAAATGTCAGTCCAAAGAAAATCATTCTCTCATGTAAAAAGAAGTTCAATTGGAGATGAGAGTTCCATGCCAAATTCTCCTGTTTTTCCTAAATACATGTCTGTGACTGAATCTAGCAAAGCAAAAGTAAGGTCTATGAGCACACCAAGAGTAAGAGCAGGATTTTTGGATATGTGTTCCTATCAGAATGAGCACCAATGCATGAATTTATGA 1092 0.3993 MAKRKSLFGWVKSLFLSESKDKNQKKWGWRLGRIKQKQYPTITASKRTLIEANAEQRKHALAVAIATASAAEAAIAAAHAAAEVVKLTGGASRSYSYLSQGNRSLAAIKIQSVYRAHLARKALRALKGVIRLQAIIRGQAVRRQVSRSLKNVPSNAKIQKENQDRNSHTEEENNKNGQIKQFPKEKKKLEENDLKAECYSQRTWNCSSHSREDIEAIWLRKQEAIVKRDRMRQYSSSQKERTFSQRAEEIGGDSCRTLGEWLHKEISDWDVLYKPSHLSNITIKNEVQEELGSKMSVQRKSFSHVKRSSIGDESSMPNSPVFPKYMSVTESSKAKVRSMSTPRVRAGFLDMCSYQNEHQCMNL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03653 363 MobiDBLite consensus disorder prediction 146 160 - -
Vivi4g03653 363 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Vivi4g03653 363 PANTHER IQ-DOMAIN 5-RELATED 6 352 - -
Vivi4g03653 363 Gene3D - 91 152 - -
Vivi4g03653 363 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Vivi4g03653 363 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Vivi4g03653 363 SMART iq_5 102 124 IPR000048 GO:0005515
Vivi4g03653 363 MobiDBLite consensus disorder prediction 161 186 - -
Vivi4g03653 363 Pfam Protein of unknown function (DUF4005) 311 345 IPR025064 -
Vivi4g03653 363 MobiDBLite consensus disorder prediction 146 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03653 Vivi-Chr4 155043404 155045314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03653 1 350 IQD Protein Family AT5G03960 43.666 2.41e-62 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03653 - - vvo:131600024 479.559