Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03576 ATGAGATTCGGAAGGTGTGTGTTTCTTTGGAGCCAAACTTTCATAGTTGTACAAAAAAGACATCATACTAAGTTATTCGCGAACAACCACACGGACAGGAATAATACATATAGTAGTGAAAATATACTGTCTGGAACTGATGTTTATACAAAAATCGATCACCCAACCGAGTTTGATTTTTATCTCTGTAGTCACGCCGGCATCCAGGGGGTGCATCCTTGTGATAAGAGAAGGCACATCACTGAGTACAAGAAAATGTTTCCAGCAATTGATTTTTCACTGATTGAGTCTGATGACGACATTTTGTGGAAACCTGATATTCGAGAGAAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGCTTTGCTAATTGTGAGCTGCGTTCAGTGGTTATCATCGATAGAGGGATGATTGGATCAAATGAGTCCTCTACCAACTTTCCTGACAAGATTCCACACGGCCTTGACCTTCCCAGTGATGTTGCTGACGAGAAAAATGCTGCGAATGATCTAACTAAGTAA 531 0.4068 MRFGRCVFLWSQTFIVVQKRHHTKLFANNHTDRNNTYSSENILSGTDVYTKIDHPTEFDFYLCSHAGIQGVHPCDKRRHITEYKKMFPAIDFSLIESDDDILWKPDIREKNEEVAARGLKFLECFANCELRSVVIIDRGMIGSNESSTNFPDKIPHGLDLPSDVADEKNAANDLTK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03576 176 MobiDBLite consensus disorder prediction 146 176 - -
Vivi4g03576 176 Pfam Piwi domain 13 72 IPR003165 GO:0003676
Vivi4g03576 176 SUPERFAMILY Ribonuclease H-like 12 71 IPR012337 -
Vivi4g03576 176 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 13 73 - -
Vivi4g03576 176 Gene3D - 10 86 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03576 Vivi-Chr4 154000302 154004202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03576 13 70 Eukaryotic Initiation Factors Gene Family AT5G43810 81.034 4.32e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03576 - - vvo:131595571 370.163