Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03573 ATGAGATTCGGAAGGTGTGTGTTTCTTTGGAGCCAAACTTTCATAGTTGTACAAAAAAGACATCATACTAAGTTATTCGCGAACAACCACACGGACAGGAATAATACATATAGTAGTGAAAATATACTGTCTGGAACTGATGTTTATACAAAAATCGATCACCCAACCGAGTTTGATTTTTATCTCTGTAGTCACGCCGGCATCCAGGGGGTGCATCCTTGTGATAAGAGAAGGCACATCACTGAGTACAAGAAAATGTTTCCAGCAATTGATTTTTCACTGATTGAGTCTGATGACGACATTTTGTGGAAACCTGATATTCGAGAGAAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGGTTGTGGACTCATAAAGAAAAAGAGATTGATGTTGTTACTCACAGTGGTTTTCTATTTCATACTCTAAGTGCTTTTGGAAATGATTGCCATCCAAATGTGAAGAGTGAAATCTGCACACAATAA 495 0.3818 MRFGRCVFLWSQTFIVVQKRHHTKLFANNHTDRNNTYSSENILSGTDVYTKIDHPTEFDFYLCSHAGIQGVHPCDKRRHITEYKKMFPAIDFSLIESDDDILWKPDIREKNEEVAARGLKFLEWLWTHKEKEIDVVTHSGFLFHTLSAFGNDCHPNVKSEICTQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03573 164 SUPERFAMILY Ribonuclease H-like 12 72 IPR012337 -
Vivi4g03573 164 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 13 73 - -
Vivi4g03573 164 Pfam Piwi domain 13 72 IPR003165 GO:0003676
Vivi4g03573 164 Gene3D - 10 87 IPR036397 GO:0003676
Vivi4g03573 164 SUPERFAMILY Phosphoglycerate mutase-like 72 149 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03573 Vivi-Chr4 154000292 154003908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03573 13 70 Eukaryotic Initiation Factors Gene Family AT5G43810 81.034 3.63e-25 99.0