Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03569 ATGCATATGGTACATTATTATAGCACTTACTTTGTTGTCTTCTGTTTCAGTTTTTTTTTGTGCAAAACCATGGCTAGCAGAAATAAAGAGAGGGAGGAGAAAGATATTGAGTTTATGTTTAACGAGGATGTAGAGGAGGAACATGATATTGAAACTGTGAAGGTAGAATCTGACAGTGGTAGCAGTGATGATCATTACGATGACGATGATGATGACGGAAATCATGCATTTCAACCTCACTCTTTCACTTCCAATCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACTGCTCCAAGTTTTGGATCGTTTCTACGAGCACCGAGTTTTATATATTCAAGCTTTGGCAATCGATCGAAGAGTAACTTGGACATAGATGGAAAATCTCCGTTTCTATCCAGTCATGAGAAAGGCTCAATGCAAAATCTTGCTGGAGAAATGCCTATTGGTCATGGTTGCAGCTTAACTCAAACAATTTTCAATGCGATTAATGTGATGGCTGGAGTTGGCCTTATATCGGTACCTTATACATTGAAACAAGCCGGTTGGGCAAGCATGTTGGTGATGACTCTTTTCGCAGTTGTTTGTTGTTATACAGCCATGCTTATGAGACAGTGTTTTGAAAGTAGAGAAGGACTCACTAGCTACCCTGATATAGGAGAAGCTGCATTTGGTAGATATGGCCGAATTTTCGTATCCATCATTTTGTACACTGAGTTATACTCATATTGTGTGGAATTCATCACTTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGAACATCGTTAGATTTAGGAGGTCTGCATTTAGATTCCATGCACTTGTTTGGAGTTATTACTGCACTTATTGTTCTCCCTACGGTTTGGTTGAAGGATCTCCGAGTAATCTCGTATCTATCAGTTGGAGGGATTGTAGCAACAATATTGATTATTATTTGTGTGTTATCGGTCGGGACAACGGTTGGATTCCATCATACTGGTCAAGTAGTGAATTGGAGTGGCATTCCATTTTCTATTGGTGTCTATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCGAATATATACCAGTCTATGGCTAACAAAAAACAGTATACCACAGCATTGATAACATGTTTTGCTCTGTGTATTTTGATATACGGAAGCGTTGCAATCATGGGATTTCTCACATTTGGCGATAGCACTTTGTCTCAGATAACATTGAATATGCCTGCAGGTGCATTTGCTTCCAAAGTTGCATTATGGACAACAGTAATTAACCCATTCACTAAATATGCTTTGTTGATGAATCCATTGGCAAGGTGTCTAGAGGAATTGCTGCCAGAAAGAATTTCAAGTACTTATTGGTGTTTTATTCTTCTTAGAACAGTACTTGTGGCATCTACGGTTTGTGCGGCTTTTCTGATTCCGTTTTTCGGACTTGTGATGGCTCTGATCGGTTCTCTCTTCAGTATGCTTGTGTCAGTGATTATGCCCAGTTTATGCTTTTTAAAAATTGTGGGGAAAAAGGCTACAAATACACAGGTTACCGTGAGCATCATAATTGCTGCAGCTGGAATGATTTGTGGACTCCTTGGAACATATTCATCTTTGCTGAATATTGCCAATAGTTACTAA 1635 0.3914 MHMVHYYSTYFVVFCFSFFLCKTMASRNKEREEKDIEFMFNEDVEEEHDIETVKVESDSGSSDDHYDDDDDDGNHAFQPHSFTSNQWPQSYKETTDSYTIATAPSFGSFLRAPSFIYSSFGNRSKSNLDIDGKSPFLSSHEKGSMQNLAGEMPIGHGCSLTQTIFNAINVMAGVGLISVPYTLKQAGWASMLVMTLFAVVCCYTAMLMRQCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLHLDSMHLFGVITALIVLPTVWLKDLRVISYLSVGGIVATILIIICVLSVGTTVGFHHTGQVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMANKKQYTTALITCFALCILIYGSVAIMGFLTFGDSTLSQITLNMPAGAFASKVALWTTVINPFTKYALLMNPLARCLEELLPERISSTYWCFILLRTVLVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGKKATNTQVTVSIIIAAAGMICGLLGTYSSLLNIANSY 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03569 544 MobiDBLite consensus disorder prediction 47 89 - -
Vivi4g03569 544 PANTHER OS05G0424000 PROTEIN-RELATED 165 525 - -
Vivi4g03569 544 MobiDBLite consensus disorder prediction 47 61 - -
Vivi4g03569 544 FunFam Amino acid transporter AVT1A 156 543 - -
Vivi4g03569 544 Pfam Transmembrane amino acid transporter protein 158 535 IPR013057 -
Vivi4g03569 544 Gene3D Amino acid/polyamine transporter I 157 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03569 Vivi-Chr4 153900043 153916435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03569 24 479 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.216 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03569 K15015 - gmx:100790344 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03569 4 153900043 153916435 Vivi4g03569 4 153900043 153916435 ECH