Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03551 ATGTTAGAGAGTGGAAGTGATCGTGATTCTGGGATGAGTTTAGAAACGGTTAATTCCAATACACAGAGAACTTCCTTAAGCAGCGCTACTGAAAGCATTTGCAGCACTAGCTTCAGTCGTCTCTCTTTCGAACTCCTTCCGTCGTCTTCACCGGAGAGTCTCTCCATCAAACCTCACCGTTCCTCCGATTTCGCCTACTCCGCCATCCGCAAATCCGGTCTCACCTTCCGTGACTTTCACCTTCTCCGCCGCATAGGCTCCGGTGACATCGGCACTGTATACCTCTGTCGCCTACGTGACTCCTCCGTAAACTACATCAACGATGAGGATAGTTCGTTCTACTACGCCATGAAGGTTGTTGACAAAGACGCTGTTGCTCTCAAGAACAAGTCACACAGAGCGGAAATGGAGAGAAAGATTCTCAAGATGCTTGATCATCCTTTTCTCCCTAGTCTCTATGCAGAGTTCGAAGCTTCTAATTTCTCTTGCATTGTTATGGAGTTTTGCTCCGGCGGTGACTTGCACTCTCTCCGTCACCGTCACCCTCGTAACCGTTTCTCTCTCTCCTCCGCACGTTTTTACGCGGCTGAGGTACTGGTGGCATTGGAGTATCTGCACATGCTAGGAATAATTTACAGAGATCTAAAACCGGAAAACGTGTTAGTCAGATCAGACGGTCACATCATGCTCTCTGATTTTGATCTATCTCTATGCTCTCACGCAATCCCAGCCGTTGAGTTATCTCCAGAAGATGCATCCTGCACCAGTCCACATTCCATCTCTTCTCCTTTCAAGTGTATCTCGAAGCGACTTTTCCGGTCCAAAAAGGTTCAAACATTTCAACCGAACCGGCTTTTCCGGTCGAGAAAGGTTGAAACATTTGAATCGAAGAGGGTTTTCGTTGCTGAACCGGTGGAGGCACGGTCGTGTTCATTCGTTGGAACACACGAGTACGTGTCACCGGAAGTAGCTTCTGGAAACTGTCACGGTAACGCTGTGGATTGGTGGTCGTTTGGGATATTCATATATGAGATGGTGTACGGAAGAACGCCGTTTGCGGGTCCATCGAATGAAGCAACTTTGCGAAACATTATAAAAAAGCCTCTTAGTTTTCCTACTGCTACGCCTTCCAGTGCGCTTGAAACGCACGCGCGGGACCTTATCTCGGGTTTGCTTAACAAAGACCCGAACCGTAGACTCGGGTCGAAACGGGGTGCTGCTGAGGTTAAGATGCATCCGTTTTTTGTTGGGCTTAACTTGGCGTTGATACGGATGGTGGCGCCGCCGGAGGTTCCGGGTTTAAGAAGACACAAAACGATGCCGTTTCTCTCCGGGAAAGATAGTAGACAACACCCTGCTTCGTCGTTTGATTACTTTTAA 1380 0.4841 MLESGSDRDSGMSLETVNSNTQRTSLSSATESICSTSFSRLSFELLPSSSPESLSIKPHRSSDFAYSAIRKSGLTFRDFHLLRRIGSGDIGTVYLCRLRDSSVNYINDEDSSFYYAMKVVDKDAVALKNKSHRAEMERKILKMLDHPFLPSLYAEFEASNFSCIVMEFCSGGDLHSLRHRHPRNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVELSPEDASCTSPHSISSPFKCISKRLFRSKKVQTFQPNRLFRSRKVETFESKRVFVAEPVEARSCSFVGTHEYVSPEVASGNCHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLSFPTATPSSALETHARDLISGLLNKDPNRRLGSKRGAAEVKMHPFFVGLNLALIRMVAPPEVPGLRRHKTMPFLSGKDSRQHPASSFDYF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03551 459 SUPERFAMILY Protein kinase-like (PK-like) 53 432 IPR011009 -
Vivi4g03551 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Vivi4g03551 459 SMART serkin_6 79 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03551 459 MobiDBLite consensus disorder prediction 9 25 - -
Vivi4g03551 459 Pfam Protein kinase domain 79 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03551 459 Pfam Protein kinase domain 309 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03551 459 Gene3D Phosphorylase Kinase; domain 1 77 168 - -
Vivi4g03551 459 Gene3D Transferase(Phosphotransferase) domain 1 169 236 - -
Vivi4g03551 459 Gene3D Transferase(Phosphotransferase) domain 1 307 433 - -
Vivi4g03551 459 ProSiteProfiles Protein kinase domain profile. 79 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g03551 459 FunFam protein kinase PINOID 2 77 168 - -
Vivi4g03551 459 FunFam serine/threonine-protein kinase D6PK-like 307 433 - -
Vivi4g03551 459 MobiDBLite consensus disorder prediction 1 25 - -
Vivi4g03551 459 FunFam protein kinase PINOID 169 237 - -
Vivi4g03551 459 PANTHER FLIPPASE KINASE 1-RELATED 23 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03551 Vivi-Chr4 153817662 153819413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03551 7 459 AGC Kinase Gene Family AT2G34650 65.517 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi4g03551 Pkinase 6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03551 - - gmx:100795536 657.521