Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03547 ATGGAGGATGAGACTCAAGCATGTAGTAAGTTTCCAAGGCTTGGAAATGTTAGCAACAAGAATGTAGGTTCGGGTTCCGGTAGAAGGAAGAGTGATGGAGGAGTTGTTGGAAGTGATTTTCAAACTTGGCAGGAGCGGCGGCAAGAAGAAGAAAACTCTTCGAGAATCGTTAGAGTGTCGCGAGGTTCGGGTGGGAAAGATAGACATAGTAAAGTGATGACTTCGAAGGGTTTGAGAGATAGAAGAGTTAGGCTTTCGGTTACGACGGCGATTCAGTTTTATGATCTTCAAGATAGGCTTGGTTATGATCAACCGAGTAAAGCGGTTGATTGGTTGATTAAGGCTGCTTCGGATTCTATCTCCGAGCTGCCTTCGCTGGACAAGACATTCGCTCGAGCTGATCAGAGTGATGAGAAAAGACAAGACGAGTTTGAGTTTGATGAAGGACGGAACAGGAACAAGAATGTTTGTTTGTCTAAGTCTGCTTGTAGCAGTACTTCGGAGACAAGTAGAGAAAATGAGTCTAGCATTGCACAACAACAGCAACATCAATGTCATCAACATCATCAAAACATGTCTCAAACAGCTTCTTTTACGGAGTTACTCACTGGCGGAATTGGAAGTAGTAACAATGGATCAATTCATGATAATCAGATTCATCATGGATGTTTCTCAGGACATTCCCCTTTTAGTAGTGAGAATGAGAGTCAGCTGCAACATTTTCCATTCATGTCTGAGCAACATCTTATGCAACCATCCGTGGTTAATTCGTCTTCATCGTCGTCTTCTCATCATCATGATAATTACAATCTCAACTTCACGATATCCTCTTCGGGCCTTGTTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACTTTTGCCTCACTTCCAGAGGTTTTCAACCATGGATCATGGATCATCAACAACAACATCATCATCCAATAATCTACCTAGTTTCTTCTCAGTTCCTCCTCCCGCTGTTGCTGCTACTCCAACCATGGATCAGCAACTTCATTTCTCACCTCTCTTTGATGCTCGGTTGCAACTTTTCTATCGCGATGGAAGCCAGCATTCAGATCAGAAGGACAAATGCAATAAGAACTGA 1107 0.4309 MEDETQACSKFPRLGNVSNKNVGSGSGRRKSDGGVVGSDFQTWQERRQEEENSSRIVRVSRGSGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVDWLIKAASDSISELPSLDKTFARADQSDEKRQDEFEFDEGRNRNKNVCLSKSACSSTSETSRENESSIAQQQQHQCHQHHQNMSQTASFTELLTGGIGSSNNGSIHDNQIHHGCFSGHSPFSSENESQLQHFPFMSEQHLMQPSVVNSSSSSSSHHHDNYNLNFTISSSGLVGYNRGTLQSNSLLPHFQRFSTMDHGSSTTTSSSNNLPSFFSVPPPAVAATPTMDQQLHFSPLFDARLQLFYRDGSQHSDQKDKCNKN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03547 368 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 287 IPR005333 GO:0003700
Vivi4g03547 368 MobiDBLite consensus disorder prediction 11 26 - -
Vivi4g03547 368 MobiDBLite consensus disorder prediction 160 193 - -
Vivi4g03547 368 Pfam TCP family transcription factor 64 188 IPR017887 -
Vivi4g03547 368 MobiDBLite consensus disorder prediction 1 76 - -
Vivi4g03547 368 ProSiteProfiles TCP domain profile. 65 123 IPR017887 -
Vivi4g03547 368 MobiDBLite consensus disorder prediction 43 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03547 Vivi-Chr4 153721447 153725189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03547 52 368 TCP Transcription Factor Family AT4G18390 37.598 1.70e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi4g03547 TCP 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03547 - - vvo:131595561 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03547 4 153721447 153725189 Vivi4g03547 4 153721447 153725189 ECH