Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03528 ATGAGGAGGAACTGCAACTTAGAACTCTGCCTTTTTCCTCAATATGTTTCTGATAGCAATCACAATCAAAACCATCACATGGTTGAAGAAGAAGCAGATAATGATAAGAGTTCAATGCAAAATCAGCAACAGCCATTGACTATTTTCTATGATGGCAAGATGTGTGTTACTCATGTCACAGAATTTCAGGCCAAATCAATCTTAATGATGGCAAATAAAAAAGTGCAAGAAACAGTAAACACACCAACAGGGTCAGAGCCATCAACACCAACAATAGTAGAATCTCCTCAGCAATCGTGTAGTCCTGGTCCTGGTCTTTCAATGAAAAGATCTTTGCAACGGTTTCTACAAAAGAGAAAAAATAGGATTCAACAAGCTTCTCCATACAATCATTAA 396 0.3737 MRRNCNLELCLFPQYVSDSNHNQNHHMVEEEADNDKSSMQNQQQPLTIFYDGKMCVTHVTEFQAKSILMMANKKVQETVNTPTGSEPSTPTIVESPQQSCSPGPGLSMKRSLQRFLQKRKNRIQQASPYNH 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03528 131 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 130 IPR040390 -
Vivi4g03528 131 ProSiteProfiles Tify domain profile. 39 73 IPR010399 -
Vivi4g03528 131 MobiDBLite consensus disorder prediction 77 106 - -
Vivi4g03528 131 Pfam tify domain 42 72 IPR010399 -
Vivi4g03528 131 MobiDBLite consensus disorder prediction 77 110 - -
Vivi4g03528 131 Pfam Jas motif 109 129 IPR018467 -
Vivi4g03528 131 SMART tify_2 39 73 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03528 Vivi-Chr4 153376209 153379402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03528 1 129 Tify Gene Family AT1G30135 42.748 4.07e-23 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi4g03528 Jas_motif 4.4e-10 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03528 - - vvo:131641562 193.356