Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03526 ATGAAGAGGAATTGCAACTTGGAACTCTGCCTTTATCCTCCATACACGTTTGAAGAAGAAAAAGATAGTGATAAGAGTTCAATGCAAAATGAGCAACAGCCACTGACCATTTTCTATGATGGCAAGATGTGTGTTATAATGTCAACTATTTCGAGTAAGAAAAGCATATATTCTTTGACAAACAATAATAATAACTGGGTTAATGTGAATGTTGTGCAGGCCAAATCAGTCTTAACGATGGCAAATAAAAAAGTGGAAGAAATAGTGAAGACACCAACAGGATCAGAGCCATCAACACCAACAACAGTAGAATCTCCTCATCAATTGTATAGCCCTGGTCATGCTCTTTCAATGAAAATGTCTTTGCAACGGTTTCTACAAAAGAGAAAAAATAGGATCCAACAAGCTTCTCCATATAATCATTAG 426 0.3615 MKRNCNLELCLYPPYTFEEEKDSDKSSMQNEQQPLTIFYDGKMCVIMSTISSKKSIYSLTNNNNNWVNVNVVQAKSVLTMANKKVEEIVKTPTGSEPSTPTTVESPHQLYSPGHALSMKMSLQRFLQKRKNRIQQASPYNH 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03526 141 Pfam Jas motif 119 139 IPR018467 -
Vivi4g03526 141 ProSiteProfiles Tify domain profile. 28 64 IPR010399 -
Vivi4g03526 141 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 140 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03526 Vivi-Chr4 153248854 153250337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03526 1 140 Tify Gene Family AT1G30135 33.775 1.74e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi4g03526 Jas_motif 6.2e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03526 - - vvo:131598110 271.166