Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03497 ATGGTGAAACTAATAACAACTTCCAAACCTCTCATTCTCAAATCAAAACTCCTCTGTTTTTCACTTTTCTACCTCTTCACCACTCTCTTTCTTGCTCTTTACACCACTCTCTCCCAATCCAAATGCTTCTTCAGATCATCCCCTTCAGATCCAATCCTCAATTCTCTCTTCAATTACCCTTCTTCCTATGGTGAACACAAATACGCCGTTTCGACTACCCGTTCCACGTGTTCTTCCCCTGTTTTCTTTTCAGATTATTGGGATGTTGTCGATGAAATCGAGAATTCTCGGAAGAATTCTCGAGGTTATGGTGGTGGTTTGCGGTATATGAAGGGTAATAATGCTGATAGTTTTGGTGGAAATCTTAGTACTCTTGCAAGGTTTTCTTATTTTAATCATCAGAATGATAGCATTGAAATTCCATGTGGATTTCTCAAGGATTTTCCAATCAGTAATTCTGACCAAATTGCAATGGAAAAGTGTGACAATGTAGTGGTAGTTTCAGCAATATTCAATGATCATGACAAAATAAGACAACCAAAGGGACTTGGATCCAAAACATCAGACATGGTGTGTTTCGTCATGTTTGTCGATGATGTTACTCTCAAAGGTTTAGAACATCACAAATTGATTTCAATTGAATCAGATGAATACAAGATAGGCGTGTGGAGGATTGTGAAAGTTGGAAAAGATGGTTTGTATGAGAATCCAGCAATGAATGGGATTATACCAAAATTTTTGGTTCATAGGTTATTTCCAAATGCACAATTCAGCATTTGGGTAGATGCAAAGTTGCAACTCATGGTTGATCCTTTGTTGTTGATTCATTCACTTGTTGTAAAGGAGAATGTAGATATGGCTATTTCAAAACACCCTTTTTATGTTCATACAATGGAAGAAGCTATGGCTACTGCTAGGTGGAAGAAATGGTGGGATGTTAATGGTTTGAAGATGCAAATGGAGACTTATTGTCAAAATGGATTGCAACCATGGAGTCCTAGCAAGAAACCCTATCCATCAGATGTACCGGATAGTGCATTGATATTGAGGAAACATGGAGTAAAAAACAACCTATTTTCTTGTCTAATGTTCAATGAGTTAGAAGCATTCAATCCAAGAGATCAATTACCATTTGCTTTTGTTAGGGATCACATGAATCCCAAACTGAAGTTAAACATGTTTGAGGTTGAAGTATTTGAACAAGTGGCAATTGAGTATAGGCACAATGTAAAGAGTAGTGATGGGACCAATTTAAAGAAAGTGTCTAGTTTAAGAAGAACAAAAAGGGCAGAGGCAGATTTGTATGTTAACAATGGTAGCTGTTGTGGTGGGTGCCACAAATATCTTTCAACAATGTGGGGTGGTGAATCCAATGATTGA 1380 0.3746 MVKLITTSKPLILKSKLLCFSLFYLFTTLFLALYTTLSQSKCFFRSSPSDPILNSLFNYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVDEIENSRKNSRGYGGGLRYMKGNNADSFGGNLSTLARFSYFNHQNDSIEIPCGFLKDFPISNSDQIAMEKCDNVVVVSAIFNDHDKIRQPKGLGSKTSDMVCFVMFVDDVTLKGLEHHKLISIESDEYKIGVWRIVKVGKDGLYENPAMNGIIPKFLVHRLFPNAQFSIWVDAKLQLMVDPLLLIHSLVVKENVDMAISKHPFYVHTMEEAMATARWKKWWDVNGLKMQMETYCQNGLQPWSPSKKPYPSDVPDSALILRKHGVKNNLFSCLMFNELEAFNPRDQLPFAFVRDHMNPKLKLNMFEVEVFEQVAIEYRHNVKSSDGTNLKKVSSLRRTKRAEADLYVNNGSCCGGCHKYLSTMWGGESND 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03497 459 Pfam Protein of unknown function (DUF616) 112 408 IPR006852 -
Vivi4g03497 459 PANTHER ALKALINE CERAMIDASE-RELATED 10 413 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03497 Vivi-Chr4 152382958 152385501 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03497 - - gmx:100809755 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03497 4 152382958 152385501 Vivi4g03497 4 152382958 152385501 ECH
Vivi4g03497 4 152382958 152385501 Vivi5g05300 5 155100300 155107825 PCT