Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03492 ATGCCATTTTCGAGAGTCAGAGCCTTCTTCCAGAGGTTCTGGTTGGACGAAATGGAAATGGGAAGCTATACACATAGTAGCTTTTTGTCTAGTGATCTTTTACCGTCTCTTGGCGCTCAAATAAACCAGGAAACTAAACGCCGAAAATACGTTATCTATCCGTTCAATCCTAAGTATAGGGTTTGGGAGTTGTTGCTGGTTGTTCTAGTCATATACTCAGCTTGGATATGTCCCTTTGAGTTTGCCTTTCTGATTTATAAGCAAAATGGATTATTCATCATAGACAACATTGTCAATGGCTTCTTCGCCATCGACATTGTGCTTACATTCTTCGTTGCATACCATGATAACCATTCGTATCTTCTCATCGATGATCCAAAGAAAATTGCAACCAGTTACTTATCCACCTGGTTTGCTTTGGATATCTGCTCCACAGCACCACTTGAGACCATTAGCCTCCTCTTCACTAACTATAACAGTGAGCTCGGTTTCAAACTTCTTAACATGTTGCGACTATGGCGCCTGAGACGAGTCAGTTCTCTGTTTGCAAGACTCGAAAAGGACATTCGCTTCAACTACTTCTGGGTTAGGTGCACAAAGCTCACTGCTGTAACCTTGTTTGCAGTGCACTGTGCAGGATGCGTTAACTATCTCATTGCAGATAGGTACCCTGATTCGAAGAGAACTTGGATAGGTGCTATGTTTCCGAATTTTAAACAAGAGAGTCTTTGGGACAGATATGTAACTTCAATATATTGGTCCATTGTTACGCTTACTACGACTGGCTATGGAGACTTACATGCAGAGAACACCATAGAGATGTTGTTTGATATCGCTTATATGTTGTTCAACTTGGGTTTAACATCATACATCATTGGAAACATGACTAACCTTGTAGTTCACTGGACAAGCCGCACCAGAAATTTTAGGGATACCGTCAAAGCAGCTTCGGAGTTTGCTTCAAGAAATCATCTGCCACATCGCGTACACAATCAAATGTTGGCACACATATGTTTGAGGTTCAAAACAGAAGGACTGAAGCAGCAAGAAGCGTTAAATGATCTTCCAAAGGCTATTCGTTCAAGCATAGCGCACCATCTGTATTTTCCTGCCATGCAGAAGGTTTACCTCTTCCAAGGAGTCTCTCACGATTTCATTTTCCAACTGGTTTCAGAAATGGAAGCAGAATATTTTCCACCAACCGAAGATGTGATACTACAAAACGAGTCTCCGACAGACCTTTATATACTGGTTACAGGAGCAGTGAATTTCGTTCACTACAACGATGGGAACGATCAAGTGGTTCTTGGCAAGGCAACTGCAGTTGATACATTTGGAGAGTTCGGAGTTTTGTATCATGTACTGCAGCCTTTCACCGTTCGTACCACGGAACTTTCTCAGATTTTAAGAGTCAACAAAACATCTTTAATGAATGTTTTACAAGCAAATCCAGCAGACGCACAGATTATAATGGATAACCTTCTAACGAGATTAAAGGGGCGTGAAGGACTCGGCTTTGAATATCCACATACAGATCATGGATTGGTTCTACATGAACTGCTTCATGGATGTAACACAACAGAATACTCTTCTCAAGAGTGTACAAATAATCCATCTGGCCATTCGTTAATGCATGAAGGAGAACACATAAATATCAGAGACTCGCAGAATAATTTGCATACAGTGACTAATGAGGTTCATTTAGTCGCTAATAACATGATACCTGAGGATGGTAAAAGTGATCTTCATGCTGCTGTGCTGCCTCTGCATAAGGGGAAACTAGATATTGTTGAAATCCTGCTTGAAAGAGATGCAAAAGCAAAGATCCCGAATAACATAGGGTGGACTCAAAAAGCTCTAGTACAACAGTTAAAAAACAAGAGTGTTTCTGATCTTACGATGAATTGTGAAAGCGGGAAGAAATCAGATGAACATAGAATAGAGATTATTGAACCACAACTTCTTAAACTTGGCAGGAATGGCTCGACCAGAAACAGTAAACAGGATGATGGTATTAGAACTATTAACTTCCCATTAGAGAAAGCATACACAAACTCCAAATCGAGAAATTCAAATTGTCCGGGTGAAATAGAAATTGCAAGGTTCGCCAAGAAGAGGGTAACAATCCATTCACCAAGTGGATGGAGAAGTAGCTCGCATGAGCAACACGGAAAACTCATAATCCTACCAGATTCATTAGAAGAGTTGCTCAAAATTGCTGGTGAAAAATTTGGCGGCTTCAAAGCCATAAAAGTAATTAATGAAGAGAATGCAGAGATAGACGATATTGATGTCATTCGAGATGGAGACCATCTCTTTCTTCTAGGCAGCAATAGCGACAATTTGAGTACATGA 2355 0.4055 MPFSRVRAFFQRFWLDEMEMGSYTHSSFLSSDLLPSLGAQINQETKRRKYVIYPFNPKYRVWELLLVVLVIYSAWICPFEFAFLIYKQNGLFIIDNIVNGFFAIDIVLTFFVAYHDNHSYLLIDDPKKIATSYLSTWFALDICSTAPLETISLLFTNYNSELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWVRCTKLTAVTLFAVHCAGCVNYLIADRYPDSKRTWIGAMFPNFKQESLWDRYVTSIYWSIVTLTTTGYGDLHAENTIEMLFDIAYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVKAASEFASRNHLPHRVHNQMLAHICLRFKTEGLKQQEALNDLPKAIRSSIAHHLYFPAMQKVYLFQGVSHDFIFQLVSEMEAEYFPPTEDVILQNESPTDLYILVTGAVNFVHYNDGNDQVVLGKATAVDTFGEFGVLYHVLQPFTVRTTELSQILRVNKTSLMNVLQANPADAQIIMDNLLTRLKGREGLGFEYPHTDHGLVLHELLHGCNTTEYSSQECTNNPSGHSLMHEGEHINIRDSQNNLHTVTNEVHLVANNMIPEDGKSDLHAAVLPLHKGKLDIVEILLERDAKAKIPNNIGWTQKALVQQLKNKSVSDLTMNCESGKKSDEHRIEIIEPQLLKLGRNGSTRNSKQDDGIRTINFPLEKAYTNSKSRNSNCPGEIEIARFAKKRVTIHSPSGWRSSSHEQHGKLIILPDSLEELLKIAGEKFGGFKAIKVINEENAEIDDIDVIRDGDHLFLLGSNSDNLST 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03492 784 Gene3D - 59 300 - -
Vivi4g03492 784 Gene3D Helix hairpin bin 301 367 - -
Vivi4g03492 784 ProSiteProfiles KHA domain profile. 706 784 IPR021789 -
Vivi4g03492 784 ProSiteProfiles cAMP/cGMP binding motif profile. 377 497 IPR000595 -
Vivi4g03492 784 ProSiteProfiles Ankyrin repeat profile. 577 612 IPR002110 GO:0005515
Vivi4g03492 784 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Vivi4g03492 784 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi4g03492 784 PANTHER POTASSIUM CHANNEL AKT1 532 776 IPR045319 GO:0005249|GO:0006813
Vivi4g03492 784 FunFam Potassium channel KAT2 365 502 - -
Vivi4g03492 784 FunFam Potassium channel KAT3 61 301 - -
Vivi4g03492 784 Gene3D Jelly Rolls 370 503 IPR014710 -
Vivi4g03492 784 Pfam Cyclic nucleotide-binding domain 397 482 IPR000595 -
Vivi4g03492 784 SUPERFAMILY cAMP-binding domain-like 304 498 IPR018490 -
Vivi4g03492 784 CDD CAP_ED 377 491 IPR000595 -
Vivi4g03492 784 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi4g03492 784 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi4g03492 784 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi4g03492 784 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Vivi4g03492 784 SMART cnmp_10 377 495 IPR000595 -
Vivi4g03492 784 Pfam KHA, dimerisation domain of potassium ion channel 705 774 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03492 Vivi-Chr4 152309069 152313508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03492 640 774 Ion Channels AT5G46240 39.568 1.42e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03492 K21867 - gmx:100783528 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03492 4 152309069 152313508 Vivi4g03492 4 152309069 152313508 ECH