Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03458 ATGTATTTTATACCTCAAATAAATACTGATGGAGTAAATGTTGATGGATTTATGTCCGAACGCCAAGTTCCTCAATTTTCAACTCAAGTTGGTATTGAAAATACTACCGTTGAAAAAGATCAAAGGTGTTCCGTTAAAAGAAAAACTCGAGAGGTATTCACAAGGGAAGAGAATATACTTCTTATGCAATCATGGCTCAATGTTTCAAAGGATCCTATTGTGGGAGTTGATCAAAAAGCTGAAGGTTTTTGGTTAAGAATCACCGATAACTATAACCAATATTGTGGGCAGTTGCGAGAAAAGCTACAAGGCCAATTAAAATACCGATGGCATCGAATAAATGGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCATGGTAAAAAAAGTGGTCAATCAGAAAAAGATATTTTGGCTAATGCACATGCTTTTTTTCTTCAAGATGAAGGAATAGCATTTAATCTAGAGTATGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGAGAGCATCAACTGAAAATTCTTCAAAAAGAACAAAGAATTCTGTTAGTGGGGCACACTCATCAAGTTATGAATATAACTCATCATCACCAATGGAGCGTCCAATGGGGCAACAAGTGGAAAAAAGGAAGAGTAAGGCAAAGGAAAAGGCAAATGCATCTGAATCTCCTTCTAATGTTGTGCAAGATACATGGAATAAAATACTAGCAACAATGGAAAGACTAGCTCAATGTAAGGAGGACGAGATGGAGTTTAAGGCAATGCAATTACTCTCGAAAGACACTTCTACGATGAATGATAGTCAACGAGATATTCATGAAAAATATTACAGTTCAGATAAGCTCTTTTGGAACTTGATTGAAGAAGAATTTATGGACAACACTGATGAAGAACTACTAAAGTCAATGCTCGAGAAGGAACATCAATCTGGAAGTTCCTCTAGACCAAAGAAAAGAATGGTAATTGATCGAAGTCGTGAAGAAAGGCACAATCCCGCCCTTGGAGCTCATGATGAATATTTTCAAATGAGGGTCGATGCAACTGGTAAAATGGGTCTTTCACCATTGCAAAAATGCACATCTGCTATTCGTATGTTGGCATATGGGTCTCCCGCTGACTGTGTAGACAAATATGTTCGAATCGGTGAAAGCACTTCAGTTGAGTGCTTAGAAAGATTCGTTCGGGGTGTAAATGTTGTATTTGGGGCAGAGTATTTGAGAAAGCCTAACAACACAGATGTTGAACATCTTTTACAAATGGGAGAGTTACGTCGCTTTCCAGGTTCAAAAAATGACATTAATGTGATAAACCAATCCAATGTGTTTAACGATATTTTGGAAGGACATGCTCCTACTATGAACTATACAATCAATAGAACATCATATAATATGGGGTATTATTTAGCGGATGATATATATCCTGAGTGGGCTACATTTGTCAAGAACATCATATAA 1467 0.3681 MYFIPQINTDGVNVDGFMSERQVPQFSTQVGIENTTVEKDQRCSVKRKTREVFTREENILLMQSWLNVSKDPIVGVDQKAEGFWLRITDNYNQYCGQLREKLQGQLKYRWHRINGLVQKFVGCYKQAVHGKKSGQSEKDILANAHAFFLQDEGIAFNLEYAWRLLKDEPKWMRASTENSSKRTKNSVSGAHSSSYEYNSSSPMERPMGQQVEKRKSKAKEKANASESPSNVVQDTWNKILATMERLAQCKEDEMEFKAMQLLSKDTSTMNDSQRDIHEKYYSSDKLFWNLIEEEFMDNTDEELLKSMLEKEHQSGSSSRPKKRMVIDRSREERHNPALGAHDEYFQMRVDATGKMGLSPLQKCTSAIRMLAYGSPADCVDKYVRIGESTSVECLERFVRGVNVVFGAEYLRKPNNTDVEHLLQMGELRRFPGSKNDINVINQSNVFNDILEGHAPTMNYTINRTSYNMGYYLADDIYPEWATFVKNII 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03458 488 Pfam Plant transposon protein 431 487 IPR006912 -
Vivi4g03458 488 MobiDBLite consensus disorder prediction 208 222 - -
Vivi4g03458 488 Pfam No apical meristem-associated C-terminal domain 156 275 IPR029466 -
Vivi4g03458 488 MobiDBLite consensus disorder prediction 178 206 - -
Vivi4g03458 488 MobiDBLite consensus disorder prediction 308 333 - -
Vivi4g03458 488 PANTHER OS12G0169200 PROTEIN 337 487 - -
Vivi4g03458 488 MobiDBLite consensus disorder prediction 173 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03458 Vivi-Chr4 151629119 151631152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03458 22 217 Glutathione S-transferase Gene Family AT5G41240 33.178 1.04e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03458 - - vvo:131598084 969.918