Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03450 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGATATTGCTGAAAAAAAAATGGAAAGCAAAGATTTCATAGGGGCTCGTACATTTGTCAATAAGGCTCAGAAACTATATCCTGATCTGGAGAATATCGCTCAAATGCTTGTTATTTGTGATGTGCATTGCTCTGCTGAGCCAAAATTACAAGGTAATACAAATGTGGTGGACTGGTATAAAGTTTTACAAATTGATCGCAATGATAATGATGCAATAATTAAGAAGCAGTACAAGAAGTTTGCTCTCCAACTCCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTTCTTTTGGATAGAGACAAACGTTTATTACTTAACATGAGCTTGAGCAAGTTTTCAATGAGCAGAACTGCCATGCCATCTCATCAACGGAGTGTTCCAGTGAATTTTAATCCTGTAATGCAAACTAATTTCCGGCCCATTTTCACAAACATAAATCCTCAGCCGCCGCAACCGCAGCCACCGCAATCACAGCCGCCGCAACCGCAGCAGTCTAAGCATCCATTTCAGCATGGGCTTAATGCTGGTGACGGTTCTACTTTTTGGACTATGTGCTCATTTTGTTCAGTGAAGTTTGAGTATTACCGGTCAGTTTTAAATAGATCTCTTCGCTGTCAACGTTGCAGTAAGCCCTTCGTTGCATATGAGGTGGATCCGCATGGTACCAAACCAGCAACTAATTCAAGTCGGAAAGCTTTTGGCCATCAGAACAATACTCCGAATCAGGTTGCTTCTAAGGTTGATGTTGGATCTCAAGGTGGTTTGCGTGCTCAGAGGTCCAATAAGGAATCTCATCATAAGAAAGGCTCTACTTCAAATGTCTCTGCAAAGCCAAATGAAAAGAGAAAGAGAAAGCATGTAGTACATTCCAGTGAAAGTTCTGAGTCTATAGGCAGCACTGATTCTGAAGATGAAGATGATTCATTTTCTAACAATGGTTTTCCTGGTGTTTCGACTTCTAGAGAAGAGCGTCCACGTAGATCTACACGGCAAAAGCACCAGGTTTCCTACAACGAGAATGTAAGTGACAATGATGATGAGTTGGAACCTTCAAAACAGGGTAAGGAAAGTGTTTCACCCCAAAGTGATCGTGAAAATAATCAGGAGGAAACTGAAACAAATGATCAGAATGGTTTGGCTGCTGGTCTGAAAGATGATTTGAAAGGGGTAAAGCAGCAGAAGCAAAAAATTAATTCTGAAGAGAGCTTAAAAAATATAGATGTAAAAATTAAGGAGGTGGGAGGAAAAGAAACAGCGGGCAGCTCAAAGATAGATGAAGTTTCAGAGCATTCAGACTCCAAATCATCAAATCATTCAGATGGTTTTGTTTATCCTGATCCAGAGTTCAGTGACTTTGACAAAGACAAGAAAGAGGGATGCTTCACTCCCGGGCAGATTTGGGCTGTTTATGATGACACAGATGGCATGCCTAGATTCTACGCTCTAATCAAAAAAGTTTTTTCTCCTGGATTCAAGTTGAAGATAACTTGGCTCGAGGCAGATCCCGATGACGAAGATGAACTCAGGTGGATTGAGGAGAAACTGCCAAGTTCCTGTGGGAAATATAAACTTGGTAAGACTGTAACCATTAAAGATCAACCGATGTTCTCTCATCTGACTTTATGGGAAAGGATTACCCGTACTACTTTTAAAGTGTATCCTAGAAAAGGAGAAACTTGGGCTCTTTTTAAGAATTGGGATATTAGATGGTATCTGGATGCTGAATCTCATCAGAAGTATGATTTGGAATATGTTGAGATCTTGTCGGATTATGTTGAAGGCGCAGGAGTAATTGTTGCATACTTGGCTAAGTTGAAAGGTTATGTGAGCCTCTTCTCTCGAATTACAAATGGAGGTACCCAACCATTTCAAATATCACCAGCTGAGTTGTTTAGATTCTCTCATAGGATTCCATCTTTTAAAATGACTGGTCAGGAAAGAGCAGGCGTTCCTGAAGGATCTTATGAGCTCGATCCTATATCCTTGCCGATAGAAGAGATTGGCGCTCCTGATGATTTAGAAGTGAACGTTGCATCTTCTGCCAAGGTGAATTTGGAAAAAAGCGAATCAGTAGAGGAGAAGAAGGATCCTGTTGATCATATTGATGATGTTAGTGCTCCATCAGCTTCGGTCCCAGATTCTTTTGAAGTTCCAGACCCTTCGTTCTACCAATTTGATGCTGAGAGGTCTCATGAAAAGTTTGAGGCTGGCCAGATTTGGGCATTTTATGGTGACGAGGACGAACTTCCAAAATACTACGGCCAGATTAAAGGGGTTAGGAGGATTGGCCCAAAAATTGAGTTGGAAGTATTTTATCTTACTGACTGCTGGCTACCTAAGAAAGTTATTAGATGGGATGATAAAGATATGATCATTTCCTGTGGAAGATTTAAAATCAAGCCAAATGCCAAGCTTTGCACTTACAGCAACACCAATTCTATTTCACATCAGGTGCATCCTAGTTCTATTTCACATCAGGTGTATGAAATTTTTCCGCGTAAGGGTGAAATTTGGGCATTATATAGGGACTGGACGACTAAAATCAAACGTTCTGATTTGAAAAACTGGAAGTACGATATAGTTGAAATTATTGAAGACGGTGATATGTGGACAGATGTTTTGTTTCTGGAGAAGGTTAGTGGTTACAGTTCAGTTTTTAAGGGCAAGTTAAGTAGCGGAGGATCAACGATGACCATGACGATCTCAAAGAATGAGGTGCTCAAATTTTCCCACAAGATACCTGCTTTCAAACTTACAGAAGAACATGGCAACAATCTGAGAGGCTTCTGGGAACTTGATCCAGGTGCAATACCACTGCATTATCTTAGCAAGGAATGA 2910 0.4072 MDCNKEEALRAKDIAEKKMESKDFIGARTFVNKAQKLYPDLENIAQMLVICDVHCSAEPKLQGNTNVVDWYKVLQIDRNDNDAIIKKQYKKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDRDKRLLLNMSLSKFSMSRTAMPSHQRSVPVNFNPVMQTNFRPIFTNINPQPPQPQPPQSQPPQPQQSKHPFQHGLNAGDGSTFWTMCSFCSVKFEYYRSVLNRSLRCQRCSKPFVAYEVDPHGTKPATNSSRKAFGHQNNTPNQVASKVDVGSQGGLRAQRSNKESHHKKGSTSNVSAKPNEKRKRKHVVHSSESSESIGSTDSEDEDDSFSNNGFPGVSTSREERPRRSTRQKHQVSYNENVSDNDDELEPSKQGKESVSPQSDRENNQEETETNDQNGLAAGLKDDLKGVKQQKQKINSEESLKNIDVKIKEVGGKETAGSSKIDEVSEHSDSKSSNHSDGFVYPDPEFSDFDKDKKEGCFTPGQIWAVYDDTDGMPRFYALIKKVFSPGFKLKITWLEADPDDEDELRWIEEKLPSSCGKYKLGKTVTIKDQPMFSHLTLWERITRTTFKVYPRKGETWALFKNWDIRWYLDAESHQKYDLEYVEILSDYVEGAGVIVAYLAKLKGYVSLFSRITNGGTQPFQISPAELFRFSHRIPSFKMTGQERAGVPEGSYELDPISLPIEEIGAPDDLEVNVASSAKVNLEKSESVEEKKDPVDHIDDVSAPSASVPDSFEVPDPSFYQFDAERSHEKFEAGQIWAFYGDEDELPKYYGQIKGVRRIGPKIELEVFYLTDCWLPKKVIRWDDKDMIISCGRFKIKPNAKLCTYSNTNSISHQVHPSSISHQVYEIFPRKGEIWALYRDWTTKIKRSDLKNWKYDIVEIIEDGDMWTDVLFLEKVSGYSSVFKGKLSSGGSTMTMTISKNEVLKFSHKIPAFKLTEEHGNNLRGFWELDPGAIPLHYLSKE 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03450 969 MobiDBLite consensus disorder prediction 439 460 - -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 240 405 - -
Vivi4g03450 969 Gene3D DnaJ domain 67 174 IPR036869 -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 439 480 - -
Vivi4g03450 969 PRINTS DnaJ domain signature 105 125 IPR001623 -
Vivi4g03450 969 PRINTS DnaJ domain signature 89 104 IPR001623 -
Vivi4g03450 969 PRINTS DnaJ domain signature 71 89 IPR001623 -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 246 282 - -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 164 197 - -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 710 726 - -
Vivi4g03450 969 SMART dnaj_3 68 125 IPR001623 -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 710 736 - -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 169 186 - -
Vivi4g03450 969 ProSiteProfiles dnaJ domain profile. 69 133 IPR001623 -
Vivi4g03450 969 MobiDBLite consensus disorder prediction 369 395 - -
Vivi4g03450 969 Pfam Domain of unknown function (DUF3444) 737 945 IPR024593 -
Vivi4g03450 969 Pfam Domain of unknown function (DUF3444) 466 670 IPR024593 -
Vivi4g03450 969 CDD DnaJ 69 119 IPR001623 -
Vivi4g03450 969 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 962 - -
Vivi4g03450 969 SUPERFAMILY Chaperone J-domain 66 136 IPR036869 -
Vivi4g03450 969 Pfam DnaJ domain 69 126 IPR001623 -
Vivi4g03450 969 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03450 Vivi-Chr4 151552416 151556802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03450 15 241 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 30.000 2.13e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03450 - - psat:127079111 1684.08