Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03417 ATGGGTTGTGTTCATGGGAAGTGTTGTAGTCTTTACCCTGCACCATCAATTGGTGGGTCTAGGGACTATAGAGAGCTTGGTCCACAAAAGAAGCATGTGCTTACACAGAGATCACTTCATTTTGTTGATGTTCCTTCTCACAATTTCACTGTGGAGTATTCTATTTTTACTCAGAGAGGTTACTACCCTGACTCACCAGATAAGGAAAATCAAGATTGTTATTGTGTAAAGACTCAACTGCAAGGTAACCCTAATGTTCATTTCTTTGGTGTTTTTGATGGACATGGTGAATTTGGTGGGCAGTGTTCTAATTTTGTTAAGAATAGGTTGGTAGAAAAACTGTCAAATGATTCTGCCTTGTTAGAGGATCCTGTTAAGGCTTATAATTCGGCTTTTTTGGATACTAATGATGACTTGCACAAGAATGAGATTGATGATTGTATGAGTGGTACTACCGCGATTACGGTGTTGGTTATAGGGGACACGCTTTATGTTGCGAATGTTGGTGATTCGAGGGCGGTTCTGGCTGTTAAAGATGGGAATAGAATTGTTGCTCAGGATTTGTCCTCTGATCAGACACCGTTTAGGAGAGATGAGTATGAGAGAGTGAAGCTTTGTGGTGCTAGGGTTTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCGGATATTCAGACTTGGGGCGATGAAGAGAGCCAGGGTGACGATCCTCCGCGATTGTGGGTTCAGAATGGGATGATTCCTGGAGCTGCTTTTACAAGGAGTGTAGGAGATAGTTTGGGTGAGACTATCGGGGTTATTGCGGTTCCGGAGGTGTTAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTTGCAAGTGATGGGGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCCGCGAGTTATTCCGATCCGCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAATTATGGTTGGAACATGAAGGTCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGGTACATCTGAATACGGATCAGGAGAGATCAATTTCAGCGCCGTAACAAAGGCCAAGAAGGGAAAGGGAGCGTCTGGTGTATCTGCTGCCAACGGTCTAGATGTTCACCGTGCCGTGAGGACTGGTTTACCCGATTCACTGTCCTGTCAGCATGTGGTGTCATCGAGAAGCCAAGCCATAGTGGTTCCTTCTCCCGAATGTCAAAGTCCAGTTGAATTGGTACAGTCTTCGTAG 1278 0.4405 MGCVHGKCCSLYPAPSIGGSRDYRELGPQKKHVLTQRSLHFVDVPSHNFTVEYSIFTQRGYYPDSPDKENQDCYCVKTQLQGNPNVHFFGVFDGHGEFGGQCSNFVKNRLVEKLSNDSALLEDPVKAYNSAFLDTNDDLHKNEIDDCMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAQDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMIPGAAFTRSVGDSLGETIGVIAVPEVLTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSGTSEYGSGEINFSAVTKAKKGKGASGVSAANGLDVHRAVRTGLPDSLSCQHVVSSRSQAIVVPSPECQSPVELVQSS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03417 425 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 47 344 - -
Vivi4g03417 425 Pfam Protein phosphatase 2C 79 317 IPR001932 -
Vivi4g03417 425 Gene3D - 39 344 IPR036457 -
Vivi4g03417 425 ProSiteProfiles PPM-type phosphatase domain profile. 52 342 IPR001932 -
Vivi4g03417 425 SUPERFAMILY PP2C-like 40 344 IPR036457 -
Vivi4g03417 425 PANTHER PROTEIN PHOSPHATASE 68 341 IPR015655 GO:0004722|GO:0006470
Vivi4g03417 425 SMART PP2C_4 48 340 IPR001932 -
Vivi4g03417 425 CDD PP2Cc 68 342 IPR001932 -
Vivi4g03417 425 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03417 Vivi-Chr4 150967965 150971093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03417 1 347 PP2C-type Phosphatase Gene Family AT3G06270 72.334 0.0 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03417 4 150967965 150971093 Vivi4g03417 4 150967965 150971093 ECH
Vivi1g01277 1 26715444 26718814 Vivi4g03417 4 150967965 150971093 PCT